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Information for unigene UN08486
| FASTA Sequence |
| Unigene ID: UN08486 | Length: 1188 |
SSR | | GGATTCTCTCCGAAATTGAGAAAACAAAAAACTCCCAGATCCTCTTCTGTCTGGTTCTGTTTCTAAAATCGTGCTTTGATTCTTCT
CTCCTCCAAAGATTATGGATCTAAAGGGACAGCTAGACAGGTTCAAGAAACAGCAAGAAAGATGCCAATCTACTCTCTCAAGCATC
AATGCTTCTCGAGCACCACCTTCTGCTCCTTCCAGGCCCTCCTCCTCCTCCTCTGTTCCTGCTGCCACCAGTCTCAAGCCTGCACC
TCCCGTCAAATTCTCCAACGACACCGAGCGTCTTCAGTTTATCAACAGCATCAGGAAGGGTCCCGTCGGTGCTCAAATCAAGCGTG
TCATCGAGCTTCTCTTTGAGACAAGGCAAGCCTTTACACCGGAGCAGATTAACGAAAGGTGTTATGTTGATATGCTTTCGAATAAA
GCTGTCTTTGATAGTCTCAGGAACAATCCCAAAGTCTATTACGACGGAAGAAGGTTCTCTTACAAGGCTAAGCATGATGTTAAAGA
CAAGAACCAGCTTCTCTCGCTGATCAAGAAGTATCCTGCTGGGATTGCGGCTGTTGATCTCAAAGACGCTTACCCTAATGTCATGG
ATGATTTACAGGCTCTGAAAGCTTCGAAACACATATGGTTCCTGTCAAACGCTGATTCACAAGAGGACATTGCTTACCCTAACGAC
TTCAAGGGGCAGATTGAGGTTGACGACGAGTTTAAATTTCTGTTCCGTGACATAGACATTCCCAGCGACCTTCTTGATGTGGAGAA
GGAGCTGCAGAAGATTGGTTTGAAGCCTGTGATGAACACTGCGCAGAGGAGAGCTGCTGCACAGATCCAAGGGGTATCGAATAAAC
CCAAGCAGAAGAAGAAGAAACAAGAGATCAGCAAGAGAACCAAACTCACCGACGCTCATCTTCCTGAGCTCTTCCAGAACCTCAAC
GCCAGCAGTTCCCGGAACTAATAAACTTCATAAATGGAATATGATTATGTCGGTTCGAAGACTGTTACTGGGAGATTGAGCCCCCA
GTTTTTTCGTATTATTCGGACATAATTTACACAGAACAAATGCAATTTGTATGGATGTATGAGTTTACAATAGTTTTCATGTACTC
CAGGAGGAAAAAAACTCGTCCATATGTAAAACGAGAAGATACTTTTGCAATGCTTATGACGTCTTAAGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867886 hypothetical protein ARALYDRAFT_492835 [Arabidopsis lyrata subsp. lyrata] | 1046 | 2e-111 |
| XP_002299546 predicted protein [Populus trichocarpa] | 1018 | 3e-108 |
| NP_193766 Transcription initiation factor TFIIE, beta subunit [Arabidopsis thaliana] | 1008 | 4e-107 |
| XP_002509755 Transcription initiation factor IIE subunit beta, putative [Ricinus communis] | 993 | 2e-105 |
| XP_002283557 PREDICTED: hypothetical protein [Vitis vinifera] | 974 | 4e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29084 Transcription initiation factor IIE subunit beta | 161 | 3e-010 |
| Q9D902 General transcription factor IIE subunit 2 | 161 | 3e-010 |
| P29540 General transcription factor IIE subunit 2 | 159 | 5e-010 |
| Q2KJF9 General transcription factor IIE subunit 2 | 158 | 7e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GKK9 Predicted protein | 1018 | 2e-108 |
| Q9SUP3 AT4g20330/F9F13_2 | 1014 | 6e-108 |
| B9RC71 Transcription initiation factor IIE subunit beta, putative | 993 | 2e-105 |
| C5YFL7 Putative uncharacterized protein Sb06g028040 | 970 | 7e-103 |
| B4FCN7 Putative uncharacterized protein | 964 | 4e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G20330.1 transcription initiation factor-related | 1018 | 1e-110 |
| AT4G21010.1 transcription initiation factor-related | 794 | 1e-084 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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