Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN08526

FASTA Sequence
Unigene ID: UN08526Length: 1290 SSRSNP
GGACTCTGTTTCTCTACCACTCCCAAGTTTCTAAAGTAGTAGAAAGATGATGATGATGAACGGAGAAGCTACAGAAGCTGAGCTTT
TCCTCAACTGTGCCGACATGTCTGTCTTAGAGCGCCAAAGGGCTCACCTCAACTACCACCACTATCCCGGCTTCTTCTCCAATTCT
TCCACGATTAACGGCGGCGATATCGACGGCTTTCTAGCGTCGGCCGGTCTGGATCTTCCGGTGATTTATGGGGAGACGACGGTGCA
CGGTGACGCGAGAATCTCTGTTACTCCGGGAAATATTACAACTGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGAGA
CAGAGACTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAAGAAGAAGAAGAGAAGTCGAAAGTAACAGAG
CAGAGCCATAAAAGCATCATGATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTAACGATTCATCAAAAGT
GACGAAAGACTCGCAGAGAACGGATTATATTCATGTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACGAG
CTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAGTTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATG
CTTGATGAGATCATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAAGCTAGCAACTGTTAGTCCAAGGCT
GGATTTCAACATCGATGACATTTTTGCCAAAGAGGTTGTCTCAGCTCCAATGACGAACTTACCAAACACTGTGATGCCACCTCACA
TGATGGTGAATTCCGGTTATCCTCATGATATGGTTGATTCCGGTTATGTTCATTTCAATCCAATGCAACAAGTGGTTGCTAGTTCT
GATCCACTGTCATGTTTCAACAATGGTCAATCAGCTGCTACTGTGTGGGACTCTGATGTGCAGAATCTTTATAGCAGTCTAGGTGT
TTGATTTAAAAGCGTTCCTTAGTTCTAGACCATTGTCAGGTTCTCTGGATACATGCAGCTTATTTTTTTCAAGTGGGAAGATCAAA
CTCATATTATTTTCATCAGAAAAGAGAGCAAAGTTAGCAGTTATTTACTAATTTCAGTAAATTAACTTAAGATTTTCAGCCCATCA
TTGTAGTATCAGAGACAAGAGTGTGTATACAGTATTGTGTGTATAGATGCCAAACAATAATATCTATTTTTCTTATCATGATTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869141 hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp. lyrata]11001e-117
NP_195179 transcription factor bHLH63 [Arabidopsis thaliana]10821e-115
AAM53299 unknown protein [Arabidopsis thaliana]10812e-115
AAM10952 putative bHLH transcription factor [Arabidopsis thaliana]10784e-115
CAA18832 putative protein [Arabidopsis thaliana]10149e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q8GY61 Transcription factor bHLH6310825e-117
Q9CAA9 Transcription factor bHLH494543e-044
Q9ZPW3 Transcription factor bHLH644258e-041
Q9C670 Transcription factor bHLH764087e-039
Q6NKN9 Transcription factor bHLH744042e-038

TrEMBL top hits (Blast detail)Scoree value
C6TKT4 Putative uncharacterized protein5083e-049
B9RH53 Putative uncharacterized protein4976e-048
B9HRM4 Predicted protein4895e-047
C0JP13 Putative basic helix-loop-helix protein BHLH74601e-043
C0Z2X3 AT1G68920 protein4431e-041

Arabidopsis top hits (Blast detail)Scoree value
AT4G34530.1 CIB1 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 1); DNA binding / transcription factor10834e-118
AT1G68920.1 basic helix-loop-helix (bHLH) family protein4543e-045
AT1G68920.2 basic helix-loop-helix (bHLH) family protein4543e-045
AT1G68920.3 basic helix-loop-helix (bHLH) family protein4436e-044
AT2G18300.1 basic helix-loop-helix (bHLH) family protein4257e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  29%
 
63  21%
 
193  21%
 
211  7%
 
103  21%

Unigene MembersMember information