RadishBase

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Information for unigene UN08528

FASTA Sequence

Unigene ID: UN08528	Length: 887	SSR
GGAGCATTTGTGGGAACTTATTACTACCCGACATTTAACTAGCGCCGCGCGGAGTCAGAGCGAGAGCGAAAAAGGCAGAGAGAGAG AGAGAGACAAGAAGGATGTTCTTCCACATAGTGTTGGAGCGAAACATGCAATTACATCCTCGATTCTTTGGTCGCAACCTTCGTGA AAATCTCGTCTCTAAGCTCATGAAAGATGTCGAGGGCACTTGCAGTGGGCGACATGGGTTTGTAGTGGCGATAACAGGAATAGAAA GCGTAGGGAAAGGATTGATCCGAGATGGGACTGCCTTCGTCACCTTCCCCGTTAAGTGCAGTGCGTTGTTTTCAGACCTTTCAAAG GCGAGATTTTGGAAGCTGTTGTCACTTTGGTCAATAAGATGGGTTTCTTCGCTGAAGCTGGCCCTGTTCAGATTTTTGTGTCCAAG CATTTGATTCCAGATGATATGGAGTTTCAGGCTGGAGACATGCCTAACTACACGACATCTGATGGATCAGTTAAGATCCAGAAAGA ATGTGAAGTAAGGCTAAAGATTATTGGAACAAGAGTCGATGCCACTGAAATCTTTTGTGTGGGTACCATCACACGATTTTTTGGGA GTCATCAACGACCCTGCAGCCGCTGCATAAGCAACGGTTCCAGGCCGACTTCGCTTTTGGTCCAGAAGATGCCATGTGATAAAAAG ATGTAACATAGACCATCTACAAGTTGAAGTTTATGGATATGTTTAATGTTTAATTTTGATTCGAGTGTAGTAGACGACTCTGTTCC TCTATAGTTTTCAAGAATGTATCCTCTTTAGCAAAAAGCTAGGACATGTACCTCCATGAGAAGCTTTTGCCTACTACTCTCCAGTC ATTTAAGTACAACGGCCATATTTTTGC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002866314 DNA-directed RNA polymerase II [Arabidopsis lyrata subsp. lyrata]	465	2e-044
NP_200726 DNA-directed RNA polymerase II subunit RPB7 [Arabidopsis thaliana]	459	1e-043
P46279 RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7	441	1e-041
XP_002282298 PREDICTED: hypothetical protein [Vitis vinifera]	441	1e-041
XP_002520498 DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative [Ricinus communis]	441	1e-041

Swiss-Prot top hits (Blast detail)	Score	e value
P38421 DNA-directed RNA polymerase II subunit RPB7	459	5e-045
P46279 DNA-directed RNA polymerase II subunit RPB7	441	7e-043
Q54P04 DNA-directed RNA polymerase II subunit rpb7	274	2e-023
Q5E9B8 DNA-directed RNA polymerase II subunit RPB7	256	2e-021
Q7ZW41 DNA-directed RNA polymerase II subunit RPB7	256	2e-021

TrEMBL top hits (Blast detail)	Score	e value
Q541V8 Putative RNA polymerase II	459	8e-044
A5C1N5 Putative uncharacterized protein	441	1e-041
B9S3C9 DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative	441	1e-041
C6SWZ3 Putative uncharacterized protein	441	1e-041
B4G147 DNA-directed RNA polymerase II 19 kDa polypeptide	440	1e-041

Arabidopsis top hits (Blast detail)	Score	e value
AT5G59180.1 NRPB7; DNA-directed RNA polymerase/ RNA binding	459	5e-046

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	3			75%


12	1			25%

Unigene Members	Member information