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Information for unigene UN08535
| FASTA Sequence |
| Unigene ID: UN08535 | Length: 2049 |
SSR | | GAAAAAAGGATTATTATGTGTTTACCACAAGCCAAATAAAAAAGAGAAGCCGATTCAACTTTTTAGCATCCTATTGTTTTAACAAT
ACCAAATTAAGAAATCACACATTACTATATTATCGACCTAACGAGTGAAAAATACAACACCCAAAAAAACTAAGAGCTTAACACGC
ATTCAAAGGGGATGTGTAATAAGTACACTATTTTCGTGACTTTTTACTCCCAACATGTATACAAACACAAAACACGAAAATAAGAA
CAAATAATTTTTAATAAACTCCACAAAAGCATTAGATTATATATATGCTGGCTAGATCTCTCAAAGGCGGTGGTGTAAAGCAGAAA
CCGGAGCATGAGTGGCGGCAGCTGGAACCGGTGATTTACATTGGTAACACTTAGCAAAGAGACCAAAAGTATCGACTTGACGAACA
AAGTTGGTTACACTTGCCCATCCACCAAACCCGAATCCGACTATTAGAACCCATATCACCACGAAAGCATTCAACACGTACATCGC
CGTCCAGCTTGGCATGAAGAACGGTGGCTTTTCCGCCGCATTCTGACGAGCTGAGGCAGATCGGTAAGTGAGCATGTGAGCAAGGG
ACGGGATGATATAGACGGTGAAGCTAACCAGAAGAGCACCAACCGCTGAATTGATCGGACCAAAGAACGGGAAGATAATAGCTAAG
AACCATATCGGTATAACCACAGGCAATCGAGCTAAAGCCCTCAAGAAAATGCTTTTTGTGTCATGCATCCCTATCACTTTCTCCCA
CACAAAGTAGAGCGGGGTACACGCGAATCCAAACGTTATAAATTGGTGAATGAGCATGAGGATAACGGCAGCGTCACGCCACCCGT
TCTTGGGGAGAAGAGAAAAAGCATTAGAGTGGTTGAGAAGTGCGTCTCCGAAGGCCCAGTAAACGGCGGAAGCTGACGGAATCGTT
AGTGTGAAAACGTATAACGTCGCCATCAAGTAAATGTACTTAAACTTCTGTGGTTTCCACATTGCATGCATTATCTCAACAGTAAC
TGCGTGACCACCAAAGGTATACAAGATATTGGTAGCTCCCGTAAAATAAAGCACTAGCTTTGTTGGACCAGTGTGCTTCACACCTT
CCGTCTGGCCGTGGATAATGGAGGCGATGGCCAAGTACCATGCCGTGTAGGTGGTCATACCCAAGCCGAGGAATGACCAGATTCGA
TAATTATGGAACGACGGTATAAAGACAGTGGTTGCACAACACGCGCCGAATATGTAAGTCCATGTTCTCTTGTCCAAGTGATCGTT
TATGTAATAAATGTTACTGGCACAAGCAATGAGTTGGATTACAGATCCAAACAAGAGGAAAGTGCAGTTAAATGCGAGGCCTACTG
CTTTCCAGTATGTGCCGAGTAACCCATCGAGTACTTCGAACCACTGAATAACGTGGTTTTTGAAGTTTTTGCCTTCTTTCTCCTTA
CGAGCTCGATACTCAACGTAGAGAACACTGATGAGGTAAGCAGTCCAGCTTCCGAGTAAGCCGTAAAAGATCTGAAGTACTATTCC
TGATAACATCCCTAGTTGACTGAACGAGTACGGTAGTGTCAGAAGCACTTGCGCCACCTGGTTAGATGCGCAGCTGAACCAAGCGT
CCCAGACAGAGCCACCGTGCCAGAGAAAGTTGCTTAGTGCAGAACCGGTGGAGGGGTCGTATTCTTCGGTTTTTCCGGTGTGGTTA
CCGTTATTCTGATCTCCGTCGTGGTCATTTCCACTAGCTACTATTGCTTCTTCTCCCGCCGACATTTTTGCTTTCTCTATGATTTG
CCTCTACTAGATCTGTGTGTGTGAGAGAGAGATCAGGGTGTTTTTCTCTTTTAAAGAAGAAGAAGGTGAGAACAAATCAGAAGCAA
ACAAAGACCACAACTGATTTAAGTTACACTTGTTCCTCTTTTTCTCTTTAAATGAATATTTACTCTCTCTGTCTTTGGCAGAGAAG
AGAACGCAGAAGATGGCAGAGAAGGAGAGAGAGAGAGTTCTTTGATCTGAGCAAAAGAAGGAACGAAAGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACZ67478 auxin resistant 1 protein [Brassica rapa subsp. campestris] | 2510 | 6e-281 |
| BAJ33762 unnamed protein product [Thellungiella halophila] | 2480 | 2e-277 |
| XP_002879728 hypothetical protein ARALYDRAFT_482819 [Arabidopsis lyrata subsp. lyrata] | 2415 | 6e-270 |
| NP_565882 auxin transporter protein 1 [Arabidopsis thaliana] | 2405 | 9e-269 |
| Q9FEL7 RecName: Full=Auxin transporter-like protein 2; AltName: Full=AUX1-like protein 2; AltName: Full=MtLAX2 | 2246 | 2e-250 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96247 Auxin transporter protein 1 | 2414 | 3e-271 |
| Q9FEL7 Auxin transporter-like protein 2 | 2246 | 1e-251 |
| Q5N892 Auxin transporter-like protein 1 | 2174 | 2e-243 |
| Q8L884 Auxin transporter-like protein 4 | 2170 | 6e-243 |
| Q9LFB2 Auxin transporter-like protein 1 | 2137 | 4e-239 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D2K9I3 Auxin resistant 1 protein | 2510 | 4e-281 |
| Q76DT1 AUX1-like auxin influx carrier protein | 2238 | 1e-249 |
| A3RID2 Auxin influx transport protein | 2220 | 2e-247 |
| Q5NDZ2 Putative auxin influx carrier protein | 2217 | 4e-247 |
| A5BII8 Putative uncharacterized protein | 2215 | 6e-247 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G38120.1 AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ auxin binding / auxin influx transmembrane transporter/ transporter | 2415 | 2e-272 |
| AT5G01240.1 amino acid permease, putative | 2137 | 4e-240 |
| AT2G21050.1 amino acid permease, putative | 2001 | 2e-224 |
| AT1G77690.1 LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter | 1979 | 8e-222 |
| AT5G01240.2 amino acid permease, putative | 1921 | 4e-215 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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