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Information for unigene UN08552
| FASTA Sequence |
| Unigene ID: UN08552 | Length: 819 |
| SNP | GGAAACTATAATGAAAACTCAAATAAATCTGTAATAATATTAATGTAAACAAAGATGTGTTCGGTCGTAGAGTGCCAAAAAGAGAG
TAAAGAATTACATGATAAATCAAATCAAATTATAGTAGAATCATTACAGTGAAACTACCTGCAGGATAATAATATAACAATGAACA
GAGAAAGAGGAAGTGTGCGTGTGTGTGTTAACTAACCAGGCTTTTACGTTCTCTTGTTGGGTTCGAAGACGTATTTGATCAACGAG
TCTTTGATGGAAAGCATCTCTGGAAACTCCTTGCTGAGCTTAGCACCATCCATCTCGTTGTTGCTTCGTGCCGCGACAATGACCTT
AGCCTGTTCTTCCAAAGTGAAGTTGGACCATTTGAAACCCGGCTCGATGTAGCTCTTGTACATCTCCAGTATCTCGTTGTGGCTCA
CCACTCCAGGATTGGTGAAGTTCCATATCCCCCTCAGGTTCCTCTTCGCCATCTCGATTGAGATTGGTAAGAGTTCGTCTAGTATG
GTCATGCTGTTTGGGATGTTCACCACTTTGTTGTAGCGAGAGATCTTGGTGATGAAGTTTCGTGGGTTGTTCAAGTCGGATGAGAT
CGGCATCCTCACTCTCAAGGTGCATACGTTGTCGAATTCTCTTAGAAGCCCTTCCACCATTGCCTTTGTTTTTGAGTAGAAGGAAC
CGAAGAAGTTCGGTTTGTCTTCTTCCTTAAAACCGATCCCTGAACCTTCTGGATGTACAGCGTCATACTCAAATATACAACCGGTA
GCAAAGTTCATCATCAACAGACCGTTCTCTCTGCAAACATCTGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564633 UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] | 1006 | 4e-107 |
| AAK82539 At1g53500/F22G10_13 [Arabidopsis thaliana] | 1006 | 4e-107 |
| NP_188097 UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] | 1002 | 1e-106 |
| XP_002882893 hypothetical protein ARALYDRAFT_478892 [Arabidopsis lyrata subsp. lyrata] | 999 | 3e-106 |
| XP_002894444 mucilage-modified 4 [Arabidopsis lyrata subsp. lyrata] | 998 | 3e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LPG6 Probable rhamnose biosynthetic enzyme 2 | 1006 | 2e-108 |
| Q9LH76 Probable rhamnose biosynthetic enzyme 3 | 1002 | 5e-108 |
| Q9SYM5 Probable rhamnose biosynthetic enzyme 1 | 932 | 7e-100 |
| Q5UPS5 Uncharacterized protein L780 | 409 | 3e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94AC9 At1g53500/F22G10_13 | 1006 | 3e-107 |
| A5BZ93 Putative uncharacterized protein | 957 | 1e-101 |
| D2WK31 Rhamnose synthase | 956 | 2e-101 |
| D2WK32 Rhamnose synthase | 941 | 9e-100 |
| D2D336 Rhamnose synthase | 939 | 2e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G53500.1 MUM4 (MUCILAGE-MODIFIED 4); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic | 1007 | 1e-109 |
| AT3G14790.1 RHM3 (RHAMNOSE BIOSYNTHESIS 3); UDP-L-rhamnose synthase/ catalytic | 1003 | 4e-109 |
| AT1G78570.1 RHM1 (RHAMNOSE BIOSYNTHESIS 1); UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic | 933 | 5e-101 |
| AT1G63000.1 NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ dTDP-4-dehydrorhamnose 3,5-epimerase/ dTDP-4-dehydrorhamnose reductase | 866 | 3e-093 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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