 |
Information for unigene UN08557
| FASTA Sequence |
| Unigene ID: UN08557 | Length: 1290 |
SSR | SNP | GGAATAAGCTTAAGAGTCACCGTAATAATTAAAAGAAACGCTCTCTCCCCTCGTGCGCCAGACTGACAAAGACTTCATAAAGAGAG
ATTCACAGAAACATAGAGAGAGAGAGAGATCAGAGCTTTTTCAATGGCAGCAGGAGGAGGAGGAGGAGGATCATCGTCTGGAAGAA
CTCCAACGTGGAAAGAGAGGGAGAACAATAAGAGGAGGGAGAGGAGGAGAAGAGCCATCACGGCAAAGATTTACTCTGGTCTCAGG
GGTCAAGGTAACTACAAGCTTCCTAAGCACTGCGATAACAACGAGGTCCTTAAAGCTCTCTGTCTCGAAGCTGGTTGGATCGTCGA
AGACGATGGCACCACTTATCGCAAGGGGTCTAAGCCACCAGCATCAGACATGTTAGGAACTCCGACAACATTCAGCACAAACTCTT
CAATCCAACCAAGTCCACAATCATCTGCTTTCCCAAGCCCAGCACCTTCTTACCATGGAAGTCCCGTCTCCTCTTCCTTCCCTAGC
CCGTCTCGTTATGACGGTAACCCTTCCTCGTACCTTCTCCTCCCTTTCCTACACAACATCGCTTCTTCCATTCCAGCAAACCTTCC
CCCTCTTAGAATATCAAACAGCGCGCCTGTTACTCCTCCTCTGTCCTCTCCTACTTCTCGTGGCTCAAAGAGGAAACTCATGACAC
AGCAGTTGCCAACTAATGGGTTGAGACATCCGCTTTTCGCTATCTCAGCTCCATCTAGTCCTACACGCCGTGTTGGTCACCAAACA
CCACCTACTATACCTGAGTGTGACGAGTCCGAGGAGAGTTCGTTTGAGGATTCAGGAAGGTGGATTAATTTTCAATCTACAGCTCC
TAGCTCACCAACGTTTAATCTTGTGAACCAAACATCTATGGTTATTGACATGAAGAGATCAGACTGGGGGATTTCTGGTATGAATA
TGAAGGGTTCAGAGTTTGAATTCGAGAATGGAACTGTTAAGCCATGGGAAGGTGAAATGATTCATGAAGTTGGCGTAGAAGATCTC
GAGCTCACGCTAGGCGGCACTAAAACCCGATGCTGAGGCTAAGATCGTGTCTTTGTGATCATAACCTATGCAAATCTTGGACATTG
TACAGGAGTTCGTGTGGCCGAGGAAGGTCGAACCTTTTAGATAATGTTACCTTTATCCGTTTATGCTTAAAATTTTTCTTCCGTGA
TGTTAATGTGACTAGAGATGTAATGTATGCTTGGTCACAGGATAATGAATGGGTTTTTGATATAATATTTGCTGTTTGCAGAGATG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q94A43 RecName: Full=BES1/BZR1 homolog protein 2 | 1530 | 1e-167 |
| XP_002866992 hypothetical protein ARALYDRAFT_912686 [Arabidopsis lyrata subsp. lyrata] | 1530 | 1e-167 |
| XP_002327823 predicted protein [Populus trichocarpa] | 1020 | 2e-108 |
| NP_195396 BES1/BZR1-like protein 2 [Arabidopsis thaliana] | 1001 | 3e-106 |
| XP_002525100 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis] | 951 | 2e-100 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94A43 BES1/BZR1 homolog protein 2 | 1530 | 6e-169 |
| Q8S307 Protein BRASSINAZOLE-RESISTANT 1 | 840 | 6e-089 |
| Q9LN63 Protein BRASSINAZOLE-RESISTANT 2 | 825 | 3e-087 |
| Q9S7F3 BES1/BZR1 homolog protein 1 | 625 | 5e-064 |
| O49404 BES1/BZR1 homolog protein 3 | 514 | 4e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9MXS0 Predicted protein | 1020 | 1e-108 |
| B9SGI1 BRASSINAZOLE-RESISTANT 1 protein, putative | 951 | 1e-100 |
| A9P7X7 Predicted protein | 933 | 2e-098 |
| A9PI05 Putative uncharacterized protein | 895 | 4e-094 |
| Q0D559 Os07g0580500 protein (Fragment) | 874 | 1e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G36780.1 transcription regulator | 1001 | 1e-108 |
| AT3G50750.1 brassinosteroid signalling positive regulator-related | 625 | 5e-065 |
| AT1G19350.4 BES1 (BRI1-EMS-SUPPRESSOR 1); protein binding / transcription factor/ transcription regulator | 575 | 3e-059 |
| AT1G19350.3 BES1 (BRI1-EMS-SUPPRESSOR 1); protein binding / transcription factor/ transcription regulator | 575 | 3e-059 |
| AT1G19350.5 BES1 (BRI1-EMS-SUPPRESSOR 1); protein binding / transcription factor/ transcription regulator | 575 | 3e-059 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
