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Information for unigene UN08564

FASTA Sequence
Unigene ID: UN08564Length: 914  SNP
ACAAAAGCAAACTAGTGCCGTTTCTTGATTTGACTTTAATATGTTCTCATCATACAATCCAACAACTTATACTTTTTTTTGTAAAC
CAACAACTTATACTTTAGTTCCATAAATATATAGGATAATACAAACAATTAGAAAAGAATTAGACACATAACCATGAAGCAAAGCA
GGAACAAGTAGACTCTGCTTAGTGACTCATCCGCCTGCATTGTCCGCCGACTTGTGTAGCGGTCGCTCCGGTAAGGTGTCACGTTG
CTTGAAGACTCTCCAAATAGTCTCCGATATACCATTTCGCATACCACACCAACCACTGGATCAGGCATTCTATACATGTACCGTTC
ACTCTCACCTTGTCCAGCACGTTGACCAACTCTTCTCAAGTCATAAACCGGACCGGATGGTCTGGTCGGTACGTTTGAACCAGACT
GGGGGACTTTTTGTCCCCGCCCGTATATAGGGACAAGCGTAGCGTCCGAGACATCGGATTTGCAGACCGGACATTTTGTGGATTCC
TTCATATTATCGTACTGGTCGACGCGTTGTCTTGAATTATTGGTGGAAGTAGTCCACTTGTAAATGCAGGGCCAACAAAATAAGTG
GCCACACAAAGTCACGACCGGGTCACGAACCTGATCCAAACATATGTTGCAGTCGAAGTCTCCTCCAGAGTCACCCAATGCTGCTA
GGTTGTCTTCTTGGTTGTGTATCTCCATTTTATCGTTGAAGAGATTGTCAGTACCAATGGATCTCTGCCGACTTTAGATGCTAGTT
TAGTAGTTTAGCCTTTGAAAACTACAGAGAGTTATTGCTGATGAACAAAGGGAGGAGAATTATTTTGAGTTAGAGAAAGCAGAATG
GGTAAGAATAATAATAGATCAAGGGTGGTGCAGAAGCAGGAGAGCTGGTATTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194556 E3 ubiquitin-protein ligase RMA2 [Arabidopsis thaliana]8344e-087
XP_002867457 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8273e-086
XP_002272136 PREDICTED: similar to ring domain containing protein isoform 2 [Vitis vinifera]3013e-025
ACU19414 unknown [Glycine max]2986e-025
ACU18214 unknown [Glycine max]2932e-024

Swiss-Prot top hits (Blast detail)Scoree value
P93030 E3 ubiquitin-protein ligase RMA28395e-089
O64425 E3 ubiquitin-protein ligase RMA12875e-025
Q6R567 E3 ubiquitin-protein ligase RMA1H12742e-023
Q8GUK7 E3 ubiquitin-protein ligase RMA32688e-023
Q96GF1 RING finger protein 1851612e-010

TrEMBL top hits (Blast detail)Scoree value
C6TC62 Putative uncharacterized protein2984e-025
C6T8R2 Putative uncharacterized protein2932e-024
B9N2C6 Predicted protein2842e-023
B9N5U0 Predicted protein2805e-023
B9RW06 Rnf5, putative2752e-022

Arabidopsis top hits (Blast detail)Scoree value
AT4G28270.1 zinc finger (C3HC4-type RING finger) family protein8403e-090
AT4G03510.1 RMA1; protein binding / ubiquitin-protein ligase/ zinc ion binding2874e-026
AT4G03510.2 RMA1; protein binding / ubiquitin-protein ligase/ zinc ion binding2874e-026
AT4G27470.1 zinc finger (C3HC4-type RING finger) family protein2687e-024
AT2G42030.1 zinc finger (C3HC4-type RING finger) family protein2355e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  43%
 
112  29%
 
121  14%
 
101  14%

Unigene MembersMember information