Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN08573

FASTA Sequence
Unigene ID: UN08573Length: 747  SNP
GTAAAGACTAAAACGACTTCCGCAACAATGTTTTGCAGCTAATAATAGTAAATAAGTAGGATCTTTCACGACAGAATAGTCGGCAC
ATTCAAGTCCAACCCCCAACCAAGACAGACCCAGAAACCAAAGGTTACTAAAAGTATAAAAAAGATTCATTGTGTCAACAAAAGGA
GAACCACAAAGGTAGGTAGAGCAGCTTCCTTTTGATATTCGTCATCATCGTATCACCCATCCCAATTTACTTTACAAAGCACCTCC
ACCTGCATGGTCTCTCATGCTTCCAGGAATCTCCTTTAACTTGTGCTGGTTTTCAAGAGCTGTTAAGGTTGATCTAAGCAGATCAT
CTCCTACAACCCCCCGCAGTTTCCTTATAAACTCTGCTCGCGTCATCTTTTTTTCCCTCAGTTGTTGGTAATCAGCGATGATGAAA
GGCTTGTCTTTCTCTGGAACCTTATGTGAGATTAATGCAAACAGAGTAGGAAAAGGCATCCATGGAGATTTGGGTTTTGTCGTGCT
TAAACAGACACTGCTTGCACTCCCTGAACACCCTTCAGGTCCGTTTGAGTCTAACTGAGGAAGAAGATCCTTGGGTCCTTCCAAAG
TGACGCCTGAGTTATCATGCTTAGCAACCAAATTACCTTCAGCATTCGTTGGATCAGACAGCTTGAACCTAACAACATATTCCGGG
AAAATATGAGTGTTCATATTCATGTTCCAGACAATGTAATTCTTCGGATTCTCGACATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAK54509 ATP8 [Arabidopsis thaliana]6596e-067
AAG23444 unknown protein [Arabidopsis thaliana]6552e-066
NP_849739 WWE protein-protein interaction domain family protein [Arabidopsis thaliana]6552e-066
XP_002890975 hypothetical protein ARALYDRAFT_473413 [Arabidopsis lyrata subsp. lyrata]6515e-066
BAJ33916 unnamed protein product [Thellungiella halophila]6481e-065

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94KU0 ATP86594e-067
Q93YR6 Putative uncharacterized protein At1g322306551e-066
Q9FVR7 Putative uncharacterized protein F3C3.16551e-066
Q8RY59 At1g32230/F3C3_16461e-065
Q9FT85 Ceo protein6452e-065

Arabidopsis top hits (Blast detail)Scoree value
AT1G32230.2 RCD1 (RADICAL-INDUCED CELL DEATH1); protein binding6565e-069
AT1G32230.1 RCD1 (RADICAL-INDUCED CELL DEATH1); protein binding6476e-068
AT1G32230.3 RCD1 (RADICAL-INDUCED CELL DEATH1); protein binding6002e-062
AT2G35510.1 SRO1 (SIMILAR TO RCD ONE 1); NAD+ ADP-ribosyltransferase3771e-036
AT3G47720.1 SRO4 (SIMILAR TO RCD ONE 4); NAD+ ADP-ribosyltransferase1135e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  13%
 
71  13%
 
63  38%
 
81  13%
 
112  25%

Unigene MembersMember information