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Information for unigene UN08575
| FASTA Sequence |
| Unigene ID: UN08575 | Length: 1018 |
| SNP | GGACACTCGTGGATTTTCACACTTTCAGAGTAATCTCATCGAGCATGATACTCCATACGTTATCTCCATCGTCTCCTCCCATTCAC
CGCCTCTATCTCCATCACTCTCAGATTCTCCCTTCTTCTCCCGTATCGCTCAAGCTCCATCCCAAAACGATATCTTTACAGATACA
TGGAAGGACTAACGCAGAACTTGCTGCTAGAGGGTTACCGGTTTTGAAAAAAGCTTCTTTGAAGAAGCTACCGAGCAAAGGATCTA
CCTTTCTGCTGGGGCATAGCTTGTTGATGGTCTCTGCTTATCCACAGCTGGCAGCAGCGTCAGAGATCGTGAAGCCTGAGCCTATT
TACGAAGTTGGAGAGTTGTTTGAGCTAGGGATTCAGCTTTCTTACTTGCTGTTGCTACTGGGTTTGCTCGGAGTTGGTACTTTCTA
TGTCATTCGCCAAGTACTTGTCCGCAGAGAACTTGACCTCTCTGCCAAAGAACTACAGGAACAAGTAAGGAGCGGGGATGCAAGTG
CAACAGAGCTCTTTGAGCTCGGTGCAGTGATGCTGAGACGCAAATTTTATCCTGCAGCCAACAAGTTCTTGCTTCAAGCCATCCAG
AAATGGGACGGTGATGATCAAGATCTTGCTCAGGTCTACAACGCTCTGGGGGTGAGTTATGTCCGAGAGGACAAACTGGACAAAGG
AATCGCTCAGTTTGAGATGGCGGTGAAGATTCAGCCTGGTTATGTAACGGCTTGGAACAACCTTGGAGATGCTTACGAGAAGAAGA
AGGAGCTGCCTTTGGCGTTGAAAGCGTTTGAAGAGGTTTTGTTGTTTGATCCGAACAACAAGGTGGCTCGGCCTCGAAGAGATGCG
TTGAAGGATCGCGTTAAGCTCTATAAAGACGTTGTGGCGGTTAAGTCCAAGAAACGGTGACGAAGAAACCAATAAACGGTGTCTCT
CTCTTATGTTTATTTTGTAAGGACATTTTGTGTTACTCTTAAACAATAAAATCACTCATCTTATTATTCGAG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002893245 tetratricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 1295 | 2e-140 |
| NP_564178 tetratricopeptide repeat-containing protein [Arabidopsis thaliana] | 1294 | 2e-140 |
| NP_850950 tetratricopeptide repeat-containing protein [Arabidopsis thaliana] | 1288 | 1e-139 |
| AAM61445 unknown [Arabidopsis thaliana] | 1265 | 5e-137 |
| AAC25516 Contains similarity to ycf37 gene product gb|1001425 from Synechocystis sp. genome gb|D63999. ESTs gb|T43026, gb|R64902, gb|Z18169 and gb|N37374 come from this gene [Arabidopsis thaliana] | 1032 | 5e-110 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96301 Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY | 131 | 7e-007 |
| O94474 Superkiller protein 3 | 130 | 9e-007 |
| O82039 Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY | 129 | 1e-006 |
| Q8RVB2 Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY | 129 | 1e-006 |
| O82422 Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY | 124 | 5e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q94EJ1 At1g22700/T22J18_13 | 1294 | 2e-140 |
| Q3ED72 AT1G22700 protein | 1288 | 8e-140 |
| Q8LFF4 Putative uncharacterized protein | 1265 | 4e-137 |
| O80551 T22J18.13 protein | 1032 | 4e-110 |
| B9SLH4 Tetratricopeptide repeat protein, tpr, putative | 882 | 9e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G22700.2 tetratricopeptide repeat (TPR)-containing protein | 1295 | 7e-143 |
| AT1G22700.1 tetratricopeptide repeat (TPR)-containing protein | 1290 | 3e-142 |
| AT1G22700.3 tetratricopeptide repeat (TPR)-containing protein | 1020 | 5e-111 |
| AT3G11540.1 SPY (SPINDLY); protein N-acetylglucosaminyltransferase/ protein binding / transferase, transferring glycosyl groups | 131 | 6e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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