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Information for unigene UN08578

FASTA Sequence
Unigene ID: UN08578Length: 562 SSRSNP
GGACTTCATCATTCCTCACACTGTTTCTCTTTCCTCCTCGGTCTGTATCGTCGCCTCTGCAGATACTCCGGCAAGCTTCTTTCTTT
CGTCGGATCAAAAGAAACAGAGAGAGAGAGATGGCGTCAAGGAGTTACGTTGCTGGTTTCGCGTTATTCACATTTGTTTTCGCCGT
CATCTCGTCTCTCGCCAGCGCTCAATCTCTAGCTCCCGCTCCTGCTCCTGCTCCGACCAGTGATGGGACATCGATAGATCAAGGGA
TTGCATATCTGCTAATGGTGGTGGCGTTGGTGCTGACTTACCTCATTCATCCTCTAGATGCGTCTTCTTCCTACAGCTTCTTCTGA
TTTGTCTCTTCATTTTCAGTTTTTGTTTTTTTGTGTGGATAAAATTCCCGAGTATGGTTATTAATTTGCTCATGATTTATGTTTTT
TTGTCTTGATTATGATCATGGATTCGTGATGATGATGACTCCTGGAGATTGAATCTCTCTTGTTTTCCATCAGATTATGATGATGA
TGATGATTCCTTTTCTTCCACATTCAATTTATTCATATATCATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566070 arabinogalactan protein 16 [Arabidopsis thaliana]3019e-026
NP_191723 arabinogalactan protein 20 [Arabidopsis thaliana]2686e-022
XP_002532657 conserved hypothetical protein [Ricinus communis]2363e-018
XP_002320846 hypothetical protein POPTRDRAFT_572354 [Populus trichocarpa]2354e-018
XP_002878394 hypothetical protein ARALYDRAFT_907707 [Arabidopsis lyrata subsp. lyrata]2345e-018

Swiss-Prot top hits (Blast detail)Scoree value
O82337 Arabinogalactan peptide 163104e-028
Q9M373 Arabinogalactan peptide 202773e-024
Q9FK16 Arabinogalactan peptide 221662e-011

TrEMBL top hits (Blast detail)Scoree value
B9T338 Putative uncharacterized protein2362e-018
A9PBL3 Putative uncharacterized protein2353e-018
A5BTA7 Putative uncharacterized protein2229e-017
B6TQ77 AGP162202e-016
B4FIH4 Putative uncharacterized protein2192e-016

Arabidopsis top hits (Blast detail)Scoree value
AT2G46330.1 AGP16 (ARABINOGALACTAN PROTEIN 16)3113e-029
AT3G61640.1 AGP202782e-025
AT5G24105.1 AGP41 (ARABINOGALACTAN-PROTEIN 41)1805e-014
AT5G53250.1 AGP22 (ARABINOGALACTAN PROTEIN 22)1662e-012
AT2G46330.2 AGP16 (ARABINOGALACTAN PROTEIN 16)1448e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  40%
 
103  30%
 
62  20%
 
81  10%

Unigene MembersMember information