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Information for unigene UN08583

FASTA Sequence
Unigene ID: UN08583Length: 2152 SSR 
AGTCCAGTCTCAGCCTTTGAGTTTTCAGCAGAGGCATCAGCCGAGAGAAAATACGACTCAACATAGCGAGACTGTTGGAGAAGATA
GCCCATCAACTGCTGATAGCCGGTCTTCTCGTTCCAGTATTGCCTATGGCCAGAACTATGGTATGCAGATGCAGCCAACGAACTTG
GGTTTGATGAGTTCAGCAACACCTGGAGGTGGAGTGGTCGTATCTTCGAGCAAACAGGGTGAAAAGAAATCACAGCAGCAGGGTTC
AAAGGCTGGTATGGAATCGTTTCAGTCCCAGGGTTATGCTATGACCTTTGCGACATTCAATGGGGCTAGTAGTACTCCTTCCCTGA
ACATGTCATCAATTCCTCAGAATCACCCTATGTTCCACACTATGCCGGAAGCAGCAAGGCAAGGTTATCAAATGATGGCAGCGAAT
GTTGCCGCAGCTCAAGCAGCTCAACAGAAAATGAACTACGGTGCTCCTTCAGATGATGGAAAATCTGGGTCTAATGCTACTGCTAG
TACGATGGAAGAACAGAGGAAGACAGGAGGAGGAGCAACAGGGAAAACGAGTGGTGTGAATGGTGGGCAGTCGATTGCTTTCTCAA
ACAAACACGACCTGGCTGATGCATCTGTTTCTGCTGTACCGAGTGGTAGCATCGTTGATACATCCCGTTTGCTCAACCTTGGTTCT
GCTTTGCCACAGAGTTCCAGTTCTATGACGAATTCCCATCAGCAGCAGCTTATGCAACAGCAGCAGCAGCAGCAGCAGCAGCTTAT
GCAACAACAGCAGCATATGCAACGGAATCAGTCGCAGCAACCTTATCCCACCATGTATCTCCAGAAGCAGCAACGGTATGCAACAT
CAGTGGCTGCATCTGCTGCTAGAACCAAAGGGTCGGTAGCGAATAATGGGAGTGGTTTCCCGGATCACAGTATCACCGTATCGCCC
GCTGGAGCCGCCAAGTTTCAAAATGCGAACACAGGCTTTCCTCAGAACCTTGTCCAGTCAAGCAGCAATCAGGTGCAGTCAACTCA
GTGGAAAAACAATTCACCAAGGACAACAAACACTGCCCAAGCTCAGTCTCCTTCCATACTGTCCCCATCATCTTCTGCTGCCGCTG
CATCTGCATCGTCCCTAAGAAACGTCTCGCATAAACAACAAAGCCGTCCTCAGCAATCGCAGATATCTTTTGCGGCAAACTCGAAA
CCAATGGCTTCTGGTTCACCAATGCAACAGATGCAAGGAGGTGCCAACAATCGAGCTCCGTCTCCTCCAGTGTTAGTTGGATCACC
TTCTACGTCTTCGGTCTCCAAAAATGCCAGCGGAAGTCCAAGAACAACTGCTTCCGCTTCCTCTGCGGTGAACAAAGCCGGACAAG
CTTCCTCTACTACTCACTCATCATCTCAGCCGTCCAAGAACTTACAGTCTGCATCTGTGGCGTCATCTACGGGTGGAAGGAATAAT
GGTCCTTCAGTTCTCGGAAACCCCACCACCAGCTCTGGATCCAAGTCCCATCAACAGCAACCGTTGTCAAAGCATGGGTTGCAGCA
GCAAGCCCAGCAGCTCTTCTTTTCGAATCCTTACTTGCAATCTCAACATCAACAGCAGCAGATCACTATATCTCCTTCCGGTGGTT
ATTACATTCAAAGACATCAGCAACAACCAGGTTCAACAGCTGCTGCTGGCGCCTCATGTACTCCTGTCACCCTCTCCAGCTGCACA
ACAGGAACCGTAACTGCCACTTCAGATCCAGCAAAAGCCATCGCAGCTGCAGCAGCAGCAGCAGCGAATAACTTGAAAGGAGGAGG
TGGTGGAATGGGGAAGATGCAGCAACATCAGTTGGGGCCTCCAGGGTTCACGTATGTACACGCGGTTCCCTCTGCGGTTCAGGTTA
AACCCGCAGATCAGAAGCAACAAGCGGGTGAGTGAAAGAACCCCCCTAAACCCCATTTTTATAACTTAAAAAGCAAAAAAAAAACA
GTGAATGGTTGGGAAAGTTGCGGTTTATAGCTTGTGCTGGCGGACACGAAAGATTTTAAAGTCGGAAGAAAGGAGAAGGGACAAAG
CCACACAAGTGTTGACAATTTTTTTTGGGAGGTGCTTTAAAGCATTGTGTACAATTAGTGTTTATATTATTCTGACAGGTTCAGTT
CC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883360 time for coffee [Arabidopsis lyrata subsp. lyrata]25545e-286
BAB01776 unnamed protein product [Arabidopsis thaliana]24928e-279
NP_566705 protein TIME FOR COFFEE [Arabidopsis thaliana]24928e-279
NP_001118676 protein TIME FOR COFFEE [Arabidopsis thaliana]24514e-274
AAK56246 AT3g22390/MCB17_12 [Arabidopsis thaliana]20706e-230

Swiss-Prot top hits (Blast detail)Scoree value
Q94KE2 Protein TIME FOR COFFEE24923e-280
Q17RH7 Putative protein TPRXL1714e-011
B4JQ42 AF4/FMR2 family member 41519e-009
P20226 TATA-box-binding protein1365e-007
Q550K8 Probable serine/threonine-protein kinase DDB_G02770711348e-007

TrEMBL top hits (Blast detail)Scoree value
B3H7F6 Uncharacterized protein At3g22380.224811e-277
B9RSQ0 ATP binding protein, putative4711e-044
B9GSN1 Predicted protein3142e-026
Q4FX62 Proteophosphoglycan 52872e-023
A4HM86 Proteophosphoglycan ppg42765e-022

Arabidopsis top hits (Blast detail)Scoree value
AT3G22380.1 TIC (TIME FOR COFFEE)24932e-281
AT3G22380.2 TIC (TIME FOR COFFEE)24815e-280
AT5G20730.1 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator1241e-006
AT5G20730.2 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator1241e-006
AT5G20730.3 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator1241e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
202  29%
 
181  14%
 
211  14%
 
81  14%
 
62  29%

Unigene MembersMember information