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Information for unigene UN08601
| FASTA Sequence |
| Unigene ID: UN08601 | Length: 799 |
SSR | | GAACTATTATTCACTATCCATAAAATGTCAGAACAGGATGATCCTCAAAACTTGAGTTGAACATAAAATGTAAGGAAAAAATTTGG
GGACTATAAGTGTTAAATTCTCACATTTTTATGATGAGGAACCAACCAAATATGCTGGTTTTGTAAAAACCTTATCAGCGTAATTC
GGGTGACTATATGAAGTGTAACAAGAGCAAGAGAGGATGATGATTCTTCCTTTGAGGCAGGAGTTGTCTTAAAGAGGACCAGGGAA
AGTTCCATTCTCTCTTTGCTCGTTCCACCTATCAACCCATTCGCCGGGGCAAAGAGATCGATAAAACTTTGAAAACTTATCGCACT
CGGGAGCTTCGTCACCCTTGGCAGCTACACATCTGTGATATTCAATGTAACGTGTGAAACAATGCCTGGTTTGGTTTGTTGTCGGG
AAACGGAAATCAGCAGGAGCTGTCTCAAGCTTGATCTCATCAGGAGTCTCCTCAGCAACTTCTTCAGTAGTGTTTTCTTCTTCAGT
AGCCGCAGCAGGAGCCTCTTCAGAAGTGACTTCCGTGGAAGCGGGAGACTCGGACTTGTCTTCAACAGCTTCCTCAGGAGGAGAAT
CTTCCTTGGCTTCAACCTCTTCAGCTTGAACTTCAACAGGCTTCACTTCTTTCTCCAAATGATATTGCTCGGAGAGCGACGGAGTT
TGAGCAGAAACCGATTCCGCCATTTGAAGTGTGTGAACTCAGGAGAGCGACTGAGGATCTTTTGATGGTTCGGTAGGTTTAAGCTC
TCTCTCTCTCTCTCTCTCTCTGGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173661 cytochrome C oxidase 6B [Arabidopsis thaliana] | 567 | 3e-056 |
| AAM63485 cytochrome c oxidase subunit, putative [Arabidopsis thaliana] | 564 | 7e-056 |
| XP_002890515 hypothetical protein ARALYDRAFT_889753 [Arabidopsis lyrata subsp. lyrata] | 547 | 6e-054 |
| ABK95863 unknown [Populus trichocarpa] | 490 | 3e-047 |
| AAM92706 putative cytochrome c oxidase subunit [Triticum aestivum] | 489 | 3e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O94581 Cytochrome c oxidase subunit 6B | 268 | 6e-023 |
| P14854 Cytochrome c oxidase subunit 6B1 | 219 | 3e-017 |
| Q5RCT0 Cytochrome c oxidase subunit 6B1 | 217 | 5e-017 |
| P00429 Cytochrome c oxidase subunit 6B1 | 213 | 2e-016 |
| Q7YRK6 Cytochrome c oxidase subunit 6B1 | 213 | 2e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S7L9 Putative cytochrome c oxidase subunit | 567 | 2e-056 |
| Q8LCP1 Cytochrome c oxidase subunit, putative | 564 | 5e-056 |
| A9PHL0 Putative uncharacterized protein | 490 | 2e-047 |
| Q8L808 Putative cytochrome c oxidase subunit | 489 | 2e-047 |
| C6SYQ4 Putative uncharacterized protein | 487 | 4e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G22450.1 COX6B (CYTOCHROME C OXIDASE 6B); cytochrome-c oxidase | 643 | 2e-067 |
| AT5G57815.1 cytochrome c oxidase subunit 6b, putative | 374 | 3e-036 |
| AT4G28060.1 cytochrome c oxidase subunit 6b, putative | 348 | 3e-033 |
| AT1G32710.1 cytochrome c oxidase subunit VIb family | 159 | 3e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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