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Information for unigene UN08609

FASTA Sequence
Unigene ID: UN08609Length: 1023 SSR 
CGAGGCAGAAAGTGTCTTATATGATTATTGGAAAGACAAAATGTGCCCTGAGGAGTAAAAAAATCTAAAATCAATCTCTACTTGAG
AAACAAGGAGAATACACATTTAAAACCTCTACTTAAACACCATACTTAGGAGACTAACAAATTGATATTTAATCAATCAGAAGCAA
CTTGACTTCCAGAGTTATAGCCACAGGGCGATTCAATCTTCGGCTTCTTTCTCTTTGTACAATACCCCGATGACGACAACCCCAGC
TGCAAGGAAGTGTCGGAATGGAGGTCATTCTCGTCGTCATCATCTGATGAAGAGCTCTCGGGCTCCGCTTGTGGGCTAGAAAACTG
AGGTATTTCACTCAGCCCTTTTGGTCCTGATGAACCTCTCCCCAACATCTCTACCTGTTTGCGCAAGATTTGGTTCTCTTCCAATG
CTCTTCTTTCCTTTAACCGGGATCTTTCCACCTGGTTGAGCAAGATTTGAGTCTTTTGATCCTTGACACTATGCAAGCTATCATTC
AACTGGTTTTCAAGAGAGATAAGATCCGAGAAACTCATACCCTCAAGCTCCTTACCCTTCAGCCTCTGAATTGCAAGCTGTAATCT
CTCAAGTTCGTTCTTCATAGCATCATCTTTACGCAACACAACAGCACCGTTCTCTTGCGAAGAACAGAGTAGAAGTTGTTGTTCGT
TCTTCTTCTTTTGGTTTATGATCGGCGGACGCAGCAGTGTGTCCATATCTTGAAAGGGTTTGTTCCATGCAGCCGCTGGAGAAATC
GTAAACCTTGCCGGTGCTGGAGAAGATGATAAGAGCAACCTCAGCGTCGCAGAGGATAGAAAGCTCTTTGGCCTTCTTCATCAACC
CGTTACGTCTTTTGGAGAAAGTGACTTGACGACTGTTCACATTCTCAATCTTCTTAATCTCAATCCTTCCTCTTCCCATCGTCTTC
TTCTTCTTCTCTGAACAACAACCAATCAATCTACGCTCTGTACAGAATCTAAAACAGAGTTAAGTCTTTGTGTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_974450 protein agamous-like 18 [Arabidopsis thaliana]6591e-066
NP_191298 protein agamous-like 18 [Arabidopsis thaliana]6591e-066
AAM65178 MADS transcription factor-like protein [Arabidopsis thaliana]6526e-066
XP_002876415 hypothetical protein ARALYDRAFT_486183 [Arabidopsis lyrata subsp. lyrata]6518e-066
BAD93735 MADS transcription factor-like protein [Arabidopsis thaliana]3651e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q38847 Agamous-like MADS-box protein AGL152912e-025
Q39295 Agamous-like MADS-box protein AGL152751e-023
P29386 Agamous-like MADS-box protein AGL62643e-022
Q6EU39 MADS-box transcription factor 62643e-022
Q6VAM4 MADS-box transcription factor 232581e-021

TrEMBL top hits (Blast detail)Scoree value
Q3EAI4 At3g573906597e-067
Q9M2K8 MADS transcription factor-like protein6597e-067
Q8LAS6 MADS transcription factor-like protein6524e-066
Q570M9 MADS transcription factor-like protein3658e-033
B9H9K4 Predicted protein3003e-025

Arabidopsis top hits (Blast detail)Scoree value
AT3G57390.2 AGL18; transcription factor6603e-069
AT3G57390.1 AGL18; transcription factor6603e-069
AT5G13790.1 AGL15 (AGAMOUS-LIKE 15); DNA binding / transcription factor2912e-026
AT2G45650.1 AGL6 (AGAMOUS-LIKE 6); DNA binding / transcription factor2642e-023
AT3G57230.1 AGL16 (AGAMOUS-LIKE 16); transcription factor2633e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  75%
 
71  25%

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