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Information for unigene UN08617

FASTA Sequence
Unigene ID: UN08617Length: 1120 SSR 
AACAGCCACGAGTCTTTTCTTATCAAAACATAATAAAGCCTTGGCCTCTCCATCCCTTTTCCTTTATAACAATCTTCCAAAACGAT
GATGCAGGCAACAATGGGACAAAAACAAGGCGTTGAATCTAGAGGAGATATCATCACCACGGGGCCGTCGCCGTTTGATTTCTTGC
CGGAGGATTGCATCTCCAAAATAATCTCCTTCACAAGTCCACGTGACGCGTGCGTCGCCGCTTCGGTTGCTAAAACCTTTGAATCT
GCGGTTAAGTCAGATACCGTGTGGGAGAAGTTTCTTCCCCCGGAATATTCCTCTTTGATCCCACGATCGAGAGCTTTCTCGTCCAA
GAAGGAGCTCTATCTCACCCTATGCGATGATCCTGTTCTTATCGAAGATGGTAAAAAGAGCTTCTGGTTAGAGAAATCGAGTGGGA
AAAGATGTATTATGTTATCTTCCAAGGAAGTGTGGATCACATGGGGAAGTAGTCCACAATATTGGCGATGGGTTTCAATTCCTGAA
TCTAGGTTTGAGAAAATAGCAGAGCTTCTCAACGTGTGTTGGTTTGAGATTCGTGCGGGGATGCATACCCGTTACCTATCTCCAGG
AACTCGGTACTCGGTTTACATTGTGTTCAAGACAGAGGACGGATGTCCTGGATTGGGTGATATCCCGGTAGAAGCTGGAGTTGGGT
TGGTTGGACAAGAATCTTCTCAAAAGTTGATATACTTTGTTGGGCCTAGTGGTCGAAGGAGAGAGAGAGAAAGGAGAGATGTTACA
AGACCAAAGGAGAGGGAAGATGGGTGGATGGAAGCTGAGCTTGGTGAGTTGTACAATGGATCATGCTGTGATGATATCTCGGTTAG
TGTTGTTGAGATTAAATCTCCATATTGGAAACGTGGTTTGATAATTCAAGGATTTGAATTCCGCCCCTCAAAAACTCAGTAACACT
ATCTATATGCAGTTTCTGGTTTATGGTTGTTTGCTTCAGTTCCATGTCTAAGCAAAGTGAAACTATTTGTTGTATTGTAATGTTTT
CGAAATTTCAAGTCTTTTTGGATTGAATGTTTGCATGGTTTGATTTTGATCACATGAAGAAGTCAATAAAAAAATTGTGTGTTACT
CC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876806 hypothetical protein ARALYDRAFT_322561 [Arabidopsis lyrata subsp. lyrata]11617e-125
NP_973399 F-box protein [Arabidopsis thaliana]11312e-121
AAC78509 lectin-like protein [Arabidopsis thaliana]11268e-121
NP_178332 phloem protein 2-B2 [Arabidopsis thaliana]11268e-121
XP_002876807 phloem protein 2-B2 [Arabidopsis lyrata subsp. lyrata]11114e-119

Swiss-Prot top hits (Blast detail)Scoree value
Q3E6P4 F-box protein At2g0224011319e-123
Q9ZVR5 Putative F-box protein PP2-B211263e-122
Q9ZVQ6 F-box protein PP2-B108513e-090
Q9ZVR0 Putative F-box protein PP2-B67993e-084
Q9ZVQ8 Putative F-box protein PP2-B87439e-078

TrEMBL top hits (Blast detail)Scoree value
C6T4B4 Putative uncharacterized protein5782e-057
B9RJ44 Putative uncharacterized protein5621e-055
C6TJF5 Putative uncharacterized protein5432e-053
B9IL91 Predicted protein5342e-052
B9HB85 F-box family protein5324e-052

Arabidopsis top hits (Blast detail)Scoree value
AT2G02240.1 MEE66 (maternal effect embryo arrest 66)11326e-124
AT2G02250.1 AtPP2-B2 (Phloem protein 2-B2); carbohydrate binding11263e-123
AT2G02360.1 AtPP2-B10 (Phloem protein 2-B10); carbohydrate binding8512e-091
AT2G02310.1 AtPP2-B6 (Phloem protein 2-B6); carbohydrate binding8002e-085
AT2G02340.1 AtPP2-B8 (Phloem protein 2-B8); carbohydrate binding7446e-079

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
75  100%

Unigene MembersMember information