Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN08623

FASTA Sequence
Unigene ID: UN08623Length: 662  SNP
GGAACAAGTTTTCTACATCCACACAAAAAAAGTTCTCCAGAACATAAGCACACATTTAGAGACATGGATGATCTTGAGTTATTACA
AGATCTGTCCAAATTCAACTTCCCAGCAACCATCAAGACCCCATCTAAAACCTCTAAAGACAACAAAGACGGCGATGATGACAACG
ACGAGGGTTTTAGCTGCAGCACACCCACATCTCAAGAACACAAGATTCCTTCTGTCCACGATTCTCCACCTCCCCCGCCGCGAAAA
CCTCGTGCACTGCCTTCAAAACCGTCGCCAACAGCGGCTCTGATGATCAGATCGTGTAAGAGGAAGCTCTTAGTGTCCACTCCTGA
GATTATCATGAACAAGGAAGAGATTGACCGTTTCTTCTCCTCCGTCTATAGTGACACGTCGACGACGACGAAACGGCGGAGACGTT
ATCTTTGTTGTGCGCGAAGATGAGCCTTTAGTTCAAGATTTACATTTCTCTACAGTTTTACTGGAAATACCGTAAACTCATTATAG
TATAAATTTAAAAGCTTCTTATAAAGTATTTTTAATTTTATAAAATGGATGGATAATTTTCTGCAGCCGCATATTAATTCCGCATG
GAGGGGTCGTTGTTGTAAATTCCGTAATAAATGAAAATTTAATTCCGTTTGCCAAGTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM63322 unknown [Arabidopsis thaliana]5027e-049
XP_002884796 hypothetical protein ARALYDRAFT_478386 [Arabidopsis lyrata subsp. lyrata]4992e-048
NP_566377 loss of giant cells from organs protein [Arabidopsis thaliana]4973e-048
BAC42937 unknown protein [Arabidopsis thaliana]4938e-048
NP_196067 cyclin-dependent protein kinase inhibitor [Arabidopsis thaliana]2643e-021

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LDA2 Putative uncharacterized protein5025e-049
Q9LPP4 At3g105254972e-048
Q8GXB8 Putative uncharacterized protein At3g10525/F13M14.314935e-048
Q9LZ78 At5g044702642e-021
B9HUW6 Predicted protein1566e-009

Arabidopsis top hits (Blast detail)Scoree value
AT3G10525.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SIM (SIAMESE); cyclin-dependent protein kinase inhibitor (TAIR:AT5G04470.1); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).4989e-051
AT5G04470.1 SIM (SIAMESE); cyclin-dependent protein kinase inhibitor2712e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  25%
 
72  25%
 
102  25%
 
111  13%
 
191  13%

Unigene MembersMember information