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Information for unigene UN08647
| FASTA Sequence |
| Unigene ID: UN08647 | Length: 931 |
SSR | | GTGAAAAGATTGTATAATTTAGAAAACTCATGAAAAGGATTGTATTTTTGATGCCAATACAAGTGATGACAGCTCAAACAAAACTC
AAGTAAACATTCCCACAAAAAAACGAGATTATCATCAGAAACACTATTCAGATAATCTAGCAGAGACGTTTCTAAGCTTGGAGTAA
ACCTTGCCAGCAGGGGAACCCATAATAAGACTGCAAAGAGAGCTCCTCGCAACCTTAATATTAGTAAAAGCACCCAAGATATGAAT
CCTCGTATCCGCAATCACAATCCTCGTCTTGGTCGAGTTCTCAATCGCAAACCTCGTCTTCCCTCCTTTCCCCGACAACCTCCCAA
TCGCCCTCGACAGATGCTCCCCTTTCAACGTCTTCACGTCTTTGATCTCAAACGACTCCACGTAAAGCTCGTCCATCCTCAGCAGC
GCCACGGCGTCGGGGATGTCGAACCCGAGCATGAACGCGTGGACGAAGTCGGCGGACTTCTGGAGGTTGCTGACGTCTGGGGTGTC
GGCTCGTGTCATGAGCTCGACTTTGTGTGACTTGAGGTTCATCCTTATGTCGACTTTCATCTGGTCGTAGACGGGCGTGTAGATGT
CTAGCCAGGCTTTCTTGAGAGGGGTGTAACGGTTGGGAGGGACGGGGATTTTTCGGAACTGGACTTTGCCGTCGGACATCTCGTGA
GCTTTCAGAGGCTTGAAGATTGGTTTTGTCGGTAAGGAAGCAGCAGGTTCTGTTGTCGCGATCTCGACTTCCATCTGAGTAGTTGT
CTCTGCCATTTTATTAACTTAAACCTGATTCTTTGATTGGGAGCTTGTGGTGGTAGGAGAAGGGAACGAGAGAGCGAGACGCTGCT
GCTGCTGCTGCTGCTGTGGTGGATGGAGGAGGAAAGGTTGCTCTGACTGCTTGAAGGTTTTTAAAGCTTTC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_566450 RNA-binding protein PNO1 [Arabidopsis thaliana] | 969 | 9e-103 |
| XP_002882813 nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata] | 963 | 5e-102 |
| XP_002330592 predicted protein [Populus trichocarpa] | 886 | 4e-093 |
| XP_002272565 PREDICTED: hypothetical protein [Vitis vinifera] | 883 | 9e-093 |
| XP_002299066 predicted protein [Populus trichocarpa] | 883 | 9e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A7RP64 RNA-binding protein pno1 | 629 | 1e-064 |
| Q5F414 RNA-binding protein PNO1 | 622 | 7e-064 |
| Q6VBQ8 RNA-binding protein PNO1 | 620 | 1e-063 |
| Q9CPS7 RNA-binding protein PNO1 | 617 | 3e-063 |
| Q6VEU3 RNA-binding protein PNO1 | 615 | 5e-063 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LTU6 At3g13230 | 969 | 7e-103 |
| B9N5M8 Predicted protein | 886 | 3e-093 |
| B9GHH7 Predicted protein | 883 | 6e-093 |
| B9SX96 Nucleic acid binding protein, putative | 872 | 1e-091 |
| C6TM61 Putative uncharacterized protein | 871 | 2e-091 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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