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Information for unigene UN08672

FASTA Sequence
Unigene ID: UN08672Length: 515  SNP
GAAGCTTTGGTCTGTTTTTATTTACGGCATAAGAAACTTCTTTAGCTAACCGTATAAACGATTACATTAATCCAAACGTTTACATT
GTTTCATAAACATAGTTTGATAAAATATTATTTATCTTCCGTACTCGTTATTTATTTATTTAGTTAATTATAAAATCTCTAGATTT
TTAGCAACTTGGATAAGGAACACCACAAGCGGATAGGAGTTTGCGAGAGTTGGGAGAGCTAATGTACTGAGCAAACGCAGGGTTCT
TAGCAAACCCACACAAGCATGGCTGTTGCTCCTTCAGCTTTGCACAACAATCACCCGAGGGTTGGCCTCCTCCTGTAATCGCTGCC
AGGCAAGGCTGAAGCTGCTTGGCGTCACATGCCGCTCCAACAGCAGTGTCTACCACTTCAGTTGGAGCCGCAAATGATGGCGAAAG
AATGACCAAAACCATGAGTGTCAATGCCAAGATCTTCATGACTAGTTAGTTTTGTATGATAAAACTGTTTGAATTTTGACTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA25680 Lipid transfer protein [Brassica rapa]3975e-037
NP_176857 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]3742e-034
XP_002887080 hypothetical protein ARALYDRAFT_475781 [Arabidopsis lyrata subsp. lyrata]3681e-033
XP_002305838 predicted protein [Populus trichocarpa]2533e-020
NP_001056241 Os05g0550300 [Oryza sativa Japonica Group]2506e-020

Swiss-Prot top hits (Blast detail)Scoree value
Q43681 Probable non-specific lipid-transfer protein AKCS92333e-019
P20145 Probable non-specific lipid-transfer protein2262e-018
P82353 Non-specific lipid-transfer protein 22226e-018
P82901 Non-specific lipid-transfer protein 2P2092e-016
P83506 Probable non-specific lipid-transfer protein 21752e-012

TrEMBL top hits (Blast detail)Scoree value
O64431 Lipid transfer protein (Fragment)3974e-037
Q9C9N7 At1g668503742e-034
B9H330 Predicted protein2532e-020
A2Y766 Putative uncharacterized protein2504e-020
D2CVS0 Putative uncharacterized protein2504e-020

Arabidopsis top hits (Blast detail)Scoree value
AT1G66850.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein3751e-036
AT5G38195.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2432e-021
AT1G48750.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2342e-020
AT5G38170.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2333e-020
AT5G38160.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2262e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  33%
 
124  33%
 
114  33%

Unigene MembersMember information