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Information for unigene UN08683

FASTA Sequence
Unigene ID: UN08683Length: 1047  SNP
CGTTACTTAGAAACACAACACAAACTTTATAAAAGAGATAGAGAAATTACAATATAAAGTAGCAAATGCAAATCAACGAAAGACAC
AAACCTTACAGAACATCACAAAGATTGAAGAGAAAATCATCAAAGAAGCACAGCAAATGTCCCACTCCAGATCATTATTTTCTTAA
TCATCGGACTCCTTTTCTTTCTTCTTCTCCTCCTCTTCAGTACCCTTGGCGTGATAACCTGGAAGCTTCTCTTTGATCTTTTCAAG
AATCCCTTTCTTCTCTTCCGGATGCTCAGCCGTTTCCTCAGTCACTGGTACCGCAGCCCCCGTGTCGACCACTTGAGAATCCTCTG
GTTTCTCGCTGTGACCTGGAAGCTTCTCCTTGATCTTCTCCATCAGTCCTTTCTTCTCCTCCGGATGCTCCACCGTTTCCTCCTTC
ACCGGCAGGGTGGCGATGACTGGAGTATCATCCTCTGTCTTTGTTCCGTGTGGAAACTTCTCCCTGATCTGCTCCATTACATCCTT
TCTATCTTCCTTTATTTTCTCATCTTCTTCGGCCATCTTCTTCTTCTTTTCCTTCTTCCTCTTCTCACCGTCTTCACCTTCTTCCT
CGCTTGAAGAGGAAGAAGAGCTGTTGGATCGGTGAAGCTTTTGGATGAGACTAGGTTTGTTCTCTTCTTCTTCTTCGTGCTTCTGG
TGGAGCTTCTCGAGGAGAGTAGGCTTATGCTCCTTCTCTTTCTCTTCTTCGTGCTTCGCCACAAACGCCGGCTGTTCCGAGACCTG
AGCCTTGTGCTCGAACTCTGACTCCAGCGTCGTCGACGTTTCTTGAGGCTTCACTTCCTCTTTTTTCTTGAGGAAGTCAAACAATC
CACGATCCTTAACCTCTCCCGTCGTCGTGACAGATGATTCCTCGGTGGTGGCAACCTTTGGGGACTCGTTCTTGAACTCCTCCGAA
GCGTTCTTGTACTCTTCCGCCATTGTGATAAACAGAAAATATGAGAGCTTTACTTTGCTTTAAAGGTGATTGATTATGTAGAGCTG
TGATGAGTATTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAR23753 dehydrin [Brassica napus]11723e-126
ABD95986 dehydrin [Brassica juncea]10962e-117
ADK66263 dehydrin [Eutrema salsugineum]8741e-091
NP_850947 dehydrin ERD10 [Arabidopsis thaliana]8247e-086
AAK38607 unknown protein [Arabidopsis thaliana]8131e-084

Swiss-Prot top hits (Blast detail)Scoree value
P42759 Dehydrin ERD108243e-087
P31168 Dehydrin COR477204e-075
P42763 Dehydrin ERD143128e-028
Q54LY8 Uncharacterized protein DDB_G02862991702e-011
Q55FI4 Nucleolar protein 581631e-010

TrEMBL top hits (Blast detail)Scoree value
Q69BP4 Dehydrin11722e-126
A9X5B4 Dehydrin (Fragment)10961e-117
Q3ED89 Putative uncharacterized protein At1g20450.27969e-083
Q7XB29 Cold-regulated protein Cor257431e-076
Q0WL48 Putative uncharacterized protein At1g204407206e-074

Arabidopsis top hits (Blast detail)Scoree value
AT1G20450.1 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding8243e-088
AT1G20450.2 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding7965e-085
AT1G20440.1 COR47 (COLD-REGULATED 47)7213e-076
AT1G76180.1 ERD14 (EARLY RESPONSE TO DEHYDRATION 14); calcium ion binding3127e-029
AT4G38410.1 dehydrin, putative1773e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  46%
 
74  31%
 
92  15%
 
101  8%

Unigene MembersMember information