Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN08694

FASTA Sequence
Unigene ID: UN08694Length: 1433 SSR 
GGCCACAGCTAATTTAGCCATAATATGAAATAAACAAAGCGTCTTCAAAACATAGTCATATGAATACACACGAGCAAGCTTCACAA
AACTAGTCGCAATTATTGTAACAACAAAATCCATTCCGTACAAATAACAAAAGTCGTTCTGTAATTCAGAGATGGGAGAGGAGAAA
TAGTAAAGTAGACGCACGTGCTCTGCCCATGCCAAGGACAACTCAAGAAGATGCGGCTGAGATAGGCACTTGTGTTGCCCATCCAA
ACTTATCACGACTGTGTTTGCTGCGAGAAGAAGAAGACGACGACCTCTTGTCTTTGCTGCCACGGGATGATGATGATGATGATGAA
CTACTGCTTCCCTTATGTCCTTTCTTTCCGTTCTTCTTCAAGCTATCTCTGCTCTTTGATTTCTGATGCTGTTTCTTGCTCCTTGT
GTGAGAGACGATGGAAGGTGGAGGATCATACACATCTTCAGCCCATGACACCCTCAGCTTCTCGAGCGATTTGCCATGCTTCTCTC
GGCTGCCTTTAATGGCTGGAATGACAGTAGCCGCCGCCGCAGTCACACTCTCAGAGAAGATGACGACCTTGGCAAGGTTCTTGTCT
TCTCCTTCATCATCGCAAGACTGAGAGGGTAAAGGCTCTGGGATCACCGGCGGTTTGGTGATGACTTTGGAATCTTCATTCAGATC
TTGGTGTATATTACCACTATCATCCCCATCAGACTCTTGAGCATCTTCAGATCCGGTAACAACGGAGACATGATTCGAGCCATTAT
TATTACAACATGTACTGGGGCTCGAAGCAGAGGCTGCATCTTTGAAATCCAACCCACCACCACAGACAGAGCTCATATCCAAAAAC
AGTAACTGGACTAGTAACCGAAACGTCAAAAACACACACCGAAAGAAAGATCACTGGCGAAACAATCTTCTTCTTCGATTAGTTTT
TGAAACCGAGTGAGTACCAAACTAAGGCGGAGATGGAACAAAAAGGCAAGCAAAAGATCTAAAGAGAGAGAAACTAAAACAAAAGG
AGCGAGAAACTTCAACTGAGATTACCACGCCAATCACTCTTTTCGAGAGGTTTCAAACGATTTGAAGAATGATAAAAAGTCAACGA
CGGAACCAAAGATATGAGTAACTCGGACCTCAGCCGCATTATATCTCTCTCTATTATTATGCTCTCTTCCAAACCCTACCAGACCA
AACAGAAAAAAAAAACACCTAATCCAATCCAACAGAGCTTATCTAGGAATCAGTGGAGACAACAACCGCCTTGGGAACAATTAATC
AATCAATCAATCAGGTGGGTAACATTAAAGCCGGATCATCGAAACCATAATAATCAGATCTTGACCATATCTAAGTATGAGATTCC
CTAATACCCAGGACGCAAAAAAAGAGAGAGAAGAAGAAGCTAATTTGAGAAGAGGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876220 hypothetical protein ARALYDRAFT_485755 [Arabidopsis lyrata subsp. lyrata]6232e-062
NP_190935 uncharacterized protein [Arabidopsis thaliana]5911e-058
XP_002879677 hypothetical protein ARALYDRAFT_345481 [Arabidopsis lyrata subsp. lyrata]3402e-029
XP_002879680 hypothetical protein ARALYDRAFT_902892 [Arabidopsis lyrata subsp. lyrata]3259e-028
NP_973623 uncharacterized protein [Arabidopsis thaliana]3186e-027

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LFF4 Putative uncharacterized protein At3g53670; F4P12.3705918e-059
Q570R6 Putative uncharacterized protein At2g374904242e-039
Q683A9 Putative uncharacterized protein At2g374904223e-039
Q5M762 At2g374804171e-038
Q3EBL1 Putative uncharacterized protein At2g37480.23184e-027

Arabidopsis top hits (Blast detail)Scoree value
AT3G53670.1 unknown protein6085e-063
AT2G37480.1 unknown protein4553e-045
AT2G37480.2 unknown protein3452e-032
AT3G53668.1 CPuORF51 (Conserved peptide upstream open reading frame 51)1462e-009
AT2G37478.1 CPuORF52 (Conserved peptide upstream open reading frame 52)1255e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  80%
 
211  20%

Unigene MembersMember information