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Information for unigene UN08706

FASTA Sequence
Unigene ID: UN08706Length: 1317 SSR 
AGTAGAGAACAAAAATGGAACTATATTGTCAAATTATGAACAATGATAATGTCATCACGTATATAACATTCAACGACTGAAACATG
GTTCTCCACTAAGGTTTTACAGATCCTAGAGCTCATCCAGCTGAATCCGTGACTGTTCTGTTCCCTTCTCCTAGTACGCATATCTC
TATACTCATCATCAATATCCTTTATGGCATCCTTTGCAAGGCCAGTTACATATGTTGCAGCTAATGCAGTTACCAACAGACCCAAC
CCGAGCGTTAGAAGCTGGCCGTTTCCTCCAGGCAACCCAACAGTTGATTCTTCTTGAATGATAGCTCGTCCAAAAGCTCCAGCGCT
GACATAAGCCCAAGATCCTGGAAGCATACCTAACCAGCTTCCAAGTACATAAGGCACAAACTTGACCGATGTCAATCCGTAAAGGT
AATTGCCAAGAGAGAAAGGAAGCAAAGGGCTTAGGCGAAGGAGGGTAACAACCCTAAACCCATTTTCACCGATGGCTTTATCAATG
GTGAGGAACTTCTTGTTGCCTTCAACTAACTTAAGGATACGCTCTCTGGCAAAGTATCTAGCAATTAGAAAAGCAACACTAGCAGC
CATAGTTCCACTGATAGAAACAATGATGGTGCCAACGAGGGAACCAAAGAGAAGACCAGCCGACATGGTCAACGGGAGAGCCGGAA
TGGCTAGGATCTCAAGGCCGGCATAGACCGCAATGAACAGTGCATACCCAGCCGGACATAACCTTCGATGAAAGTGGAGAACTGAG
TGAGAAAGGTATTGATCTGGTCTCTGTAGACGTATCCAACGCCGGCGAATCCGCCAACAGTACCAACCAACAAAACTCCGGCAAGA
ATCGTGCCCTTGAGAGCAGCATCCCCATTGGATCCGTCGTCATCGCTCTCGGCCGCGGGGGATGTAGCGTCGTCGTCTTCGTTACC
GTCGTCGCTGGATTTGGGATTGAAGAACCATCGGAGACTCTTGGGAGGAGGGGCGGTGGAAGGAGGAGGCGGGGAACGGCGGAGAG
ACTGTTGGTTCTTCTTGGTTTGTTTGAGGGAAGAGCATGGCTTGAGGAAATGGAATCGTCTGAAGGAGGAGGAGGAGGAGGTGAAG
GTGAATAATGGGAGGGAAGAGGATCTGAGAGTTAGAGTGAGGCTGCGCATCTTTCAAGCAGCGTTGACGATGATGATTGAGTTAAA
GCTGCTTCTTCTGTTTTCCATCCAGAAAGTTTTCTCTGTGGGATGATGGGATTGTTGGCGCGGTGTTTTTTTTCCTACCGAAGAAG
AAGAAGAAGAAGACGATGTGGCTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564182 SNARE associated Golgi protein family [Arabidopsis thaliana]8912e-093
XP_002525514 conserved hypothetical protein [Ricinus communis]8615e-090
XP_002327389 predicted protein [Populus trichocarpa]8572e-089
CBI31257 unnamed protein product [Vitis vinifera]8562e-089
ABK95224 unknown [Populus trichocarpa]8482e-088

Swiss-Prot top hits (Blast detail)Scoree value
Q55909 TVP38/TMEM64 family membrane protein slr03053272e-029
P76219 TVP38/TMEM64 family membrane protein ydjX2653e-022
P67117 TVP38/TMEM64 family membrane protein Rv1491c/MT15381758e-012
P67118 TVP38/TMEM64 family membrane protein Mb1528c1758e-012
P76221 TVP38/TMEM64 family inner membrane protein ydjZ1515e-009

TrEMBL top hits (Blast detail)Scoree value
O23137 At1g22850/F29G20_198911e-093
B9SHP5 Putative uncharacterized protein8614e-090
A9PH39 Predicted protein8571e-089
A9PFS1 Putative uncharacterized protein8481e-088
B9IQ94 Predicted protein (Fragment)8426e-088

Arabidopsis top hits (Blast detail)Scoree value
AT1G22850.1 INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03260.1); Has 3098 Blast hits to 3098 proteins in 664 species: Archae - 6; Bacteria - 1614; Metazoa - 182; Fungi - 59; Plants - 145; Viruses - 0; Other Eukaryotes - 1092 (source: NCBI BLink).8917e-096
AT5G19070.1 LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03260.1); Has 3029 Blast hits to 3029 proteins in 693 species: Archae - 10; Bacteria - 1724; Metazoa - 229; Fungi - 74; Plants - 161; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink).2752e-024
AT1G03260.1 LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19070.1); Has 3432 Blast hits to 3432 proteins in 730 species: Archae - 8; Bacteria - 1831; Metazoa - 239; Fungi - 87; Plants - 162; Viruses - 0; Other Eukaryotes - 1105 (source: NCBI BLink).2626e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  17%
 
112  33%
 
71  17%
 
61  17%
 
101  17%

Unigene MembersMember information