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Information for unigene UN08717

FASTA Sequence
Unigene ID: UN08717Length: 1289 SSR 
GGACAAATATCTTTTCTTTATAGCATTTCTAGATTTACAGAAGCTTCCTTCAGATTCACAATCTCATCAAGCACACACAAACCCTT
TCAAAATGATCTAAAGAAGAAACAAGAACCCTACTATACAATCAAATCACAACCAACCCAGAAAGCAAAAGTTTCCTCTTTTACTT
TCTTCTCTTAACTCTTTTCTTCCTCTTGTTCTTGAGGAAACTAGGGTTTGATTTTATTCTCCAAAAGAAAAGGTCTTTCATCCAAA
AAAAGCAAAACCCAGCTCGTGTTTGTGTGTGTGTGTGTGTGTCTGTATATAGATAAACATTTACATCCCCTAATAAGGTTACATAT
CAAAATGGGAAGGGGAAGAGTAGAGCTAAAGAGGATAGAGAACAAGATTAACAGACAAGTAACGTTTGCTAAGCGTAGGAACGGTT
TGCTGAAAAAAGCTTATGAGCTTTCTGTTCTCTGCGATGCTGAGGTTTCTCTCATCGTCTTCTCCAACCGTGGCAAGCTCTATGAA
TTCTGCAGCACCTCCAACATGCTCAAGACACTGGACAGATACCAGAAGTGTAGTTATGGTTCAATTGAAGTCAACAACAAACCTGC
CAAAGAACTCGAGAATAGCTACAGAGAGTATTTGAAGCTGAAAGGTAGATATGAAAATCTGCAACTTCAGCAGAGAAATTTACTTG
GAGAAGACCTTGGACCTTTGAACTCAAAAGAGCTAGAGCAGCTTGAGCGTCAACTAGACGGCTCTCTGAAGCAAGTTCGCTGCATC
AAGACACAGTATATGCTTGACCAGCTCACTGACCTCCAAGGCAAAGAGCATATGTTGCTTGAAGCCAATAGAGCTTTGTCAATGAA
GCTGGAAGATATGATAGGCATGAGAAGTCACCACGTAGGAGGGACATGGGAAGGCGGTGATCAGCAAAATGTTGCCTATGGACATC
ATCAGACTCAATCTCAGGGACTGTTCCAGTCTCTTGAATGTGATTCCACTTTGCAAATTGGGTACAACCATCCAGTGTGTTCAGAG
CAAATGGCTGTAACGACTCAAGGTCAGATCCAACCAGGAAACGGTTACATCCCTGGCTGGATGCTTTGAGTGATGCATGCTTCTGA
TCTAATGATGAGAACAAGCTGGATCTTTAAGCGTTCAAGTGGTGGGTTCTTGATGATGAAAATGAGATTTGGATTATATTAGTACG
GAATTTAATGAATTGTGTTTATGTAATGACATAAGTGGCTATATATAGTTGTGATAGCCTTCAACACCACTCTTCTGTTGCAGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884314 SEPALLATA2 [Arabidopsis lyrata subsp. lyrata]12227e-132
AAU82009 SEPALLATA2 [Arabidopsis thaliana]12201e-131
AAO42085 putative floral homeotic protein AGL4 [Arabidopsis thaliana]12192e-131
NP_186880 developmental protein SEPALLATA 2 [Arabidopsis thaliana]12182e-131
ABD60322 SEP2 [Boechera stricta]12182e-131

Swiss-Prot top hits (Blast detail)Scoree value
P29384 Developmental protein SEPALLATA 212189e-133
P29382 Developmental protein SEPALLATA 111301e-122
Q03489 Agamous-like MADS-box protein AGL9 homolog7332e-076
O65874 MADS-box transcription factor 17171e-074
Q38694 Agamous-like MADS-box protein AGL9 homolog6972e-072

TrEMBL top hits (Blast detail)Scoree value
Q5XXL5 SEPALLATA212208e-132
Q84WB0 Putative floral homeotic protein AGL412191e-131
Q1KV04 SEP212181e-131
Q5XXL4 At3g0231012181e-131
Q5XXJ5 SEPALLATA2 (Fragment)12073e-130

Arabidopsis top hits (Blast detail)Scoree value
AT3G02310.1 SEP2 (SEPALLATA 2); DNA binding / protein binding / transcription factor12196e-134
AT5G15800.1 SEP1 (SEPALLATA1); DNA binding / transcription factor11311e-123
AT5G15800.2 SEP1 (SEPALLATA1); DNA binding / transcription factor10011e-108
AT1G24260.1 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor6963e-073
AT1G24260.2 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor6963e-073

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  50%
 
121  17%
 
92  33%

Unigene MembersMember information