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Information for unigene UN08727

FASTA Sequence
Unigene ID: UN08727Length: 788  SNP
GACGTCATGATTCTCCCGCCAACCACACCAGATCTTTTTGTTTCATCCATCTCCTTCCGCCTCCTCGTCTCTTCCGTGGTCTCACT
CATTTTCATCGATAGGCACGAGAATGGCTTGTTTTCGTTCGATAGGCTCTTTAACTTCTCTCACTCATTCTCCTCGTGATGTTCCA
CGCTCCTCAGGCATTGTCTTAACTTCATGCTCTGTTATTCCCATCACGCGCTCCTCCTTCATCGGCTCTCCCATCTCCCTCCCGCG
CGTCCATCCACCATCATCTCAAACCCCTCCAAGACCGCGTAACCTCCTCCTCCCAATCACGATGATGGTGAAACCAACGCTCCAGT
TCATCCAAGGCACAGACGAGATGACCATCCCTGACGTGAAGCTGACTCGGTCAAGAGACGGATCCAACGGGATGGCGCTCTTCAAT
TTCGACCAGCCATCGGTTTTCGACTCGAGCGGTGAGGTAGGGGAGATAACCGGGCTGTACATGATCGACGAGGAAGGTGTGATTCA
GTCAACGGACGTGAACGCGAGATTCGTCAACGGGAAACCTGAAGGCATCGTGGCCAAGCACGTGATGCGCACGCCCAAGGAATGGG
ATAGGTTCATGAGGTTTATGGAACGGTACTCTGACCAGAACGGTTTACAGTTCGTTAAAAAGCAATGAGGTGGAGACATTGATTGT
CCTATGAACAAAATGTTATTTTTAAATCATTCATTAGAGCTTTGACTATACTATAATTCCAAAAAAACCTAAATATTTTGAAACAA
GAACGGTTATATAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB81454 photosystem II protein W-like [Arabidopsis thaliana]7852e-081
XP_002869488 photosystem II reaction centre W family protein [Arabidopsis lyrata subsp. lyrata]7752e-080
NP_567814 photosystem II reaction center PSB28 protein [Arabidopsis thaliana]7653e-079
NP_001190860 photosystem II reaction center PSB28 protein [Arabidopsis thaliana]7053e-072
XP_002271666 PREDICTED: hypothetical protein [Vitis vinifera]5432e-053

Swiss-Prot top hits (Blast detail)Scoree value
Q8W0Y8 Photosystem II reaction center PSB28 protein, chloroplastic7651e-080
Q0JG75 Photosystem II reaction center PSB28 protein, chloroplastic4919e-049
A0T0H5 Photosystem II reaction center psb28 protein3592e-033
O78418 Photosystem II reaction center psb28 protein3573e-033
P49508 Photosystem II reaction center psb28 protein3573e-033

TrEMBL top hits (Blast detail)Scoree value
C6SZM2 Photosystem II reaction center psb28 protein5287e-052
A9PHJ0 Photosystem II reaction center psb28 protein5233e-051
A9NPG6 Photosystem II reaction center psb28 protein5035e-049
B9SKL9 Photosystem II reaction center psb28 protein5035e-049
B9GRD0 Photosystem II reaction center psb28 protein5019e-049

Arabidopsis top hits (Blast detail)Scoree value
AT4G28660.1 PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN)7831e-083

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  15%
 
66  46%
 
102  15%
 
112  15%
 
191  8%

Unigene MembersMember information