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Information for unigene UN08748
| FASTA Sequence |
| Unigene ID: UN08748 | Length: 1235 |
SSR | | GGGCCTCTGGACCCTGACCATCTTCCTCAAAACACGATTCGATTAAACTTCGTCTTGATCTCTGCCTTGTTTTTTCTCTGTGCATT
CCCTGATGTTTGTTCCGAGAATTCTGTCGCGAGTTTCCGCAGCGCGGGATTGCGCTCCTCTCTCTCCGCCGCCGCTCTTCCGGCGA
GGAGCCGGACTCCTATATTCTCGAGCCGGTATCACTCCATCGTTAACGAATTTTCCCAAAAGATTGCTGCAGTTCAGGTTCTGCCT
CTTGGTTCGTTTCCACTCCAAAGGTTCTCTTTTTCTTCTTCCTCCACCACGCCTGAATCAAATGAAAAGGAGAGCAACTCTGAGGC
CTCGAAGACATCTGGGGAGAAAGCTACAGCTGAGGCAAACGAGTCAGGCCCTGACTCAGAACCCTCCAAAGTTTCGAGAAGGAGGA
GAAGTGATAAACGAGCTGCAGTTCCTGATTCAGATTCCGGGAGTGATGATGATGATGAGGAGTTGTCAGTGGATGATTTGAGGAAG
CTCGTTGCTGAGAAGGAAGAGCTGCTTTCTGAAAAGGAGGAAGAGATTAAGCAAATGAAAGATAAAGTTCTTCGCACTTACGCAGA
GATGGAGAATGTTATGGACAGAACAAGACGTGATGCTGAAAACACCAAGAAGTATGCCATACAGAATTTTGCAAAGAGCCTTTTGG
ATGTGGCGGATAATCTTGGAAGAGCTTCTTCGGTTGTCAAGGAAAGCTTCTCAAAGCTTGACACTACGGAAGATTCGGCTGGAGCT
ACTCCGCTCTTAAAGACCCTTTTAGAAGGTGTGGAGATGACTGAGAAACAGCTTGCTGAGGTGTTTAAGAAATTTGGTATGGAGAA
GTACGATCCTATCAACGAGCCGTTTGATCCAAACAGACATAACGCAGTGTTTCAAGTCCCGGATGCTTCTAAGCCAGAAGGCACAG
TTGCTCATGTCCTGAAGTCTGGTTACACGTTGTTTGATCGAGTTATAAGACCGGCTGAGGTTGGTGTTACTCAAGGAGGAGAGGCT
GAAGGAAGACAAGAAAGAGTCTGATGCTTAACAAGGAGTCAGCTGGTTTTCATAAGTTTTTGCTACTGTTCTTTGTTTCGAGCTAC
TCAGTTAACAGAAGTCATAGTTTTTCTCTTGTCGTTTGGTTATTCATTGGATGAACATGATCTTCCCATAAGTTACTGGACATGGC
AAGCTTGCCGAGGAAGTCCTGCTTTTGTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567757 molecular chaperone GrpE [Arabidopsis thaliana] | 1195 | 9e-129 |
| XP_002867541 hypothetical protein ARALYDRAFT_492124 [Arabidopsis lyrata subsp. lyrata] | 1151 | 1e-123 |
| CAB36524 grpE like protein [Arabidopsis thaliana] | 1061 | 3e-113 |
| BAA13686 AR192 [Arabidopsis thaliana] | 875 | 1e-091 |
| CAN76715 hypothetical protein VITISV_018795 [Vitis vinifera] | 814 | 1e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P38523 GrpE protein homolog, mitochondrial | 347 | 8e-032 |
| Q79V15 Protein grpE | 263 | 5e-022 |
| Q3SW78 Protein grpE | 262 | 6e-022 |
| B3Q970 Protein grpE | 261 | 8e-022 |
| Q6NCY6 Protein grpE | 258 | 2e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LB47 GrpE protein homolog | 1195 | 6e-129 |
| Q9SZ18 GrpE protein homolog | 1061 | 2e-113 |
| Q96515 GrpE protein homolog | 875 | 8e-092 |
| A5BCM7 Putative uncharacterized protein | 814 | 9e-085 |
| B9IEG4 GrpE protein homolog (Fragment) | 794 | 2e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G26780.1 AR192; adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization | 1195 | 3e-131 |
| AT5G55200.1 co-chaperone grpE protein, putative | 817 | 2e-087 |
| AT1G36390.1 co-chaperone grpE family protein | 125 | 4e-007 |
| AT1G36390.2 co-chaperone grpE family protein | 125 | 4e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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