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Information for unigene UN08753
| FASTA Sequence |
| Unigene ID: UN08753 | Length: 1443 |
SSR | SNP | GATACGAAGCTTTTTCCCCTTTTGTTACAAGAAAGTTAGTTGCCTTTCTACCTCTCAAGCTTTGAAAGGTAACTATAAGTTTTTAC
ATAAAAAGATTTTAGCTCTAGTGGCAAAAGATGTCAGAGACTTGGGTACATTACAATACTACCACACACACACAAGAGTAAAACTC
AAGTCACTCGTAGTACATAACATGGTAAAAACATAATGATCAAGCAAAGGTGTCTTCACGATCTCCCTCAACGATGTCAGCGTCTT
CCATGTTGCTGAACTCGAGGAAATGAGTGGGTCGATGTTCCTCGTGATAGTACTCCTTTGGGGATCCAAGTTTAACGCTGTATTTC
ATGCCCACCGTGTGCTTCACGCCCATAAAGTTGTAGTTCCACGGTCCGTTCTCAGGAACCATGTAAAACCCGAGGAAGCGGTCACT
CAATAGCATCTGAACCTTCTCATAATGGGTGGGAAGGTAGCCATGAGGATTGCTGCCTGTGTCCTTGTTGAGACGTCCCCATTCAT
ATCCAGCTTGGGTCAGCTTATATGATGTCAAAGAGCAGGACCCCGGAGTGAAACTGCATGTCAGGATGATACATTTTTCTCCATCC
CATTGCTTGTTGCTCTCCAGAATGCGGGAATGAGCGGTCACATCCTGTGGTGACAATTGAGGGAGCTCGTTAGGCTGTGTGTGCAG
CCATCCCAATGGCTCGAGATCATTCAAGAAATCATGCTCAGGAAGAGCTGACGGCAGGTTCACATGCTGGTGACTTCCCCACTGCG
GCACCATCACAACACAACGGATTTCCTTCACCTGGGGATTATCCGGTGGGCTGATACCATACAGATATCCAGCAATTTGAGTCCGA
AGATCTGCTACGCATATGAGCTTCTTCAGGATGTTCTTCGGCATGATGTATGTGTATCCCGTCTCCTTTATGTCATCTGAGTTCAC
GTAGATGTGATTGACTCTGAGGTAGAGGTTGGTAGCTGATATTGCACGCACACGCCAATCTGTCTTGGAACCGAATGCAGTTTGCT
CGTAGGGGCTAGTGGTAGTGACAATGAGCTCTTCACCATGAACATTTGTCGTTCTGGTTGTGACTGCGTTAAGCTGGCTGGCTTCT
TTTGCCTGTTTCTCAATCTCAGCTATCTGTTGCCTCTGTTGAGAGGGTGGGGTGATCTCAGCTCCAAGGATAATATCTCTGATCTC
TGATTGTGTCAGAGCTGAGGTATTCACATTGTTCTTCTTTGCGTAGTCAGATAGGATAAGATCCCTAAGAGCTACCTCCACCTTCA
TCCACTGGTCGTCAGTGAGAGAGGGCCAGATGTGATGTGGCTCGGTGACAACAGACTTGTCGGGCTTCAACAACATCTTAGCCTTC
TCATTATTCACGTGAAGAGCACGAAGGATCAGAATGAGTCTTGAAAAGGCAGTGTACGAAGAGATGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889313 hypothetical protein ARALYDRAFT_477251 [Arabidopsis lyrata subsp. lyrata] | 2107 | 2e-234 |
| NP_178124 Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] | 2084 | 9e-232 |
| XP_002517654 Pre-mRNA-processing-splicing factor, putative [Ricinus communis] | 2048 | 1e-227 |
| XP_002327417 predicted protein [Populus trichocarpa] | 2043 | 5e-227 |
| CBI36339 unnamed protein product [Vitis vinifera] | 2043 | 5e-227 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q99PV0 Pre-mRNA-processing-splicing factor 8 | 1684 | 9e-187 |
| Q6P2Q9 Pre-mRNA-processing-splicing factor 8 | 1679 | 4e-186 |
| P34369 Pre-mRNA-splicing factor 8 homolog | 1598 | 9e-177 |
| Q8T295 Pre-mRNA-processing-splicing factor 8 homolog | 1442 | 1e-158 |
| O14187 Pre-mRNA-splicing factor spp42 | 1266 | 3e-138 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SSD2 F18B13.15 protein | 2084 | 6e-232 |
| B9RV85 Pre-mRNA-processing-splicing factor, putative | 2048 | 9e-228 |
| B9MWN9 Predicted protein | 2043 | 4e-227 |
| D5ABN8 Putative uncharacterized protein | 2017 | 4e-224 |
| A9U2F5 Predicted protein | 2003 | 2e-222 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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