Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN08772

FASTA Sequence
Unigene ID: UN08772Length: 1563 SSR 
CTTCACCATTGTTGATGGAGAAGAAAGCTTCATATCTCATTTTCTTGCCTATGTTGCTGAGAGAATGAAAGAGAGGAAAGTAGATG
AAAATTAAGCTTTTTTTTTCTTTCTTTTTCTTTTCTTGATACTAAAAGCTACATAAACCCAATTAGGTCAAATGAAAGTTTGTGTT
GAGAGATAAATTTTTTTAGGTTGCATGTTACTTACCCTTCAAGTTTACATCTTTTTAACCTTTAGATTCTCATTTTGTTCTTATCC
TTTCTCATAAAAAGAAAAAAAAATCAGATCTTTCCTTCTTCTTTTGTATTCCCTTAGCCACAAAGTTCGAACCTTTTTAGAAGAAA
GGCTATGGATCGAAGAGAAGCAATGGGTTCTTATTACATCCAAAGAGGCATGCCTGGTTCTGCTCCTCCTCCTCCTCCTCCTCAGA
CTCAACAGCCCTTTCAAGGGTTTCACCATTTCTCCAATCCCAACTCTCCTTTCTTGTCTAACCAGAACAACCCAGGAAGCGGCGGC
GGTGGCTCCGCCGCGTTCGTGTCTCCTCCTCCTTTACAAACGGAGTCTTCTCCGGTTGATTCTTCAGCTCCTCCTCCTCCTCCTAC
TTCCGGTGAGACTTCTGGGAAGAGGAAGAGAGGACGGCCTAGGAAATACGGACAAGACGGTTCTGTTTCTTTAGCATTGTCTCCTT
CCATGTCCCCCCCAAACTCTAACAAACGTGGTCGTGGTAGACCTCCTGGCTCCGGCAAGAAGCAAAGACTTGCTTCCATTGGTGAC
TTGATGCCTTCATCGTCAGGGATGAGCTTCACGCCGCACGTAATCGTAGTTTCCGTTGGTGAAGACATTGCATCAAAGGTACTGTC
TTTCTCTCAGCAAGGTCCAAGAGCGATCTGTGTCTTATCAGCTATTGGTGCAGTTTCTACTGCAACTCTTATTCAACCAGCACCAT
CCCATGGAGCTATAACCTACGAGGGTCGTTTCGAGCTTGTTTCTCTATCACTTTCTTATCTGAACGCAAATGACAATGACTACTCA
AACCGAACTGGAAACCTAGCGGTCTCACTCGCTAGCCCTGATGGTCGTGTCATCGGTGGTGGAATTGGAGGGCCTCTAATAGCAGC
AAGCCATGTTCAGGTTATCGTTGGAAGCTTCCTTTGGGCGGTTCCGAAAGGGAAGGTTAAAAAAAGAGATGAAGCTTCTGAAGATG
TCCAAGAGACTGATGCTTTGGAGAACAACGACAACACATCAGCAGCACCAACGTCGCCTCCTGTTCCTCAGAACCTTGTTCAGACT
CCTGTAGGCATGTGGTCAACCGGTTCAAGATCGATGGATATGCATCACGCTCATATGGACATTGATTTAATGCGCGGATGATGATG
ATTCATGTGTGTAGTACATAACCATTGAAACCTAGGAGAAGAAGAAGAAGACAAAGACTTTAAAGCTAACACCTCTCTGAGAGTAT
TATTGTCTTTTGGTTTTATGTCTAGGAAACAAAAAGACTTGTAGTGATTTTTCAGAACTCATGTGTTTTCATTTATTATTCTACAA
CATACAATCTGTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878374 hypothetical protein ARALYDRAFT_324562 [Arabidopsis lyrata subsp. lyrata]13312e-144
NP_191690 AT hook motif DNA-binding family protein [Arabidopsis thaliana]13161e-142
CAB71061 putative DNA-binding protein [Arabidopsis thaliana]13008e-141
NP_182109 AT hook motif DNA-binding family protein [Arabidopsis thaliana]10159e-108
XP_002272142 PREDICTED: hypothetical protein [Vitis vinifera]8016e-083

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7C9 Putative DNA-binding protein ESCAROLA1992e-014

TrEMBL top hits (Blast detail)Scoree value
Q8L7L5 AT-hook motif nuclear localized protein 1113168e-143
Q9M2D3 Putative DNA-binding protein13006e-141
O80834 AT-hook motif nuclear localized protein 910156e-108
C6TK21 Putative uncharacterized protein7801e-080
B9RDQ4 DNA binding protein, putative7773e-080

Arabidopsis top hits (Blast detail)Scoree value
AT3G61310.1 DNA-binding family protein13173e-145
AT2G45850.1 DNA-binding family protein10541e-114
AT2G45850.2 DNA-binding family protein10541e-114
AT1G63470.1 DNA-binding family protein6184e-064
AT1G63480.1 DNA-binding family protein5772e-059

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  33%
 
122  33%
 
82  33%

Unigene MembersMember information