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Information for unigene UN08780

FASTA Sequence
Unigene ID: UN08780Length: 2014 SSR 
TATCAGCTTCCTCAAAATGTGCAACGATTGAATCTTGCAAATAACCAATTCACTGGAGCTGTTCAATACTCCATTTCCAATATGGC
ATCACTTAAGTATCTTAATCTTGGTCACAATCAGTTGAAGGGGCAAGTATCTGTGGACTTCTCCAAGCTCACCTCTCTTACAACCT
TGGACTTCTCTTTCAACTCTTTCACCTTGTCTCTACCGGGAACTTTCACCTCTCTTACAAGTTTAAAATCACTATACCTTCAGAAC
AATCAGTTCTCAGGAACACTCAATGTCTTAGCCGGTCTTCCTCTTGAGACTCTGAACATTGCAAACAATGATTTCACTGGCTGGAT
CCCCAGTACCTTAAAGGGCATTAATTTAATAAAAGATGGTAACTCTTTCAATAATGGACCTGCACCTCCACCACCACCTGGTACAC
CTCCAATCCATCGCTCACCGAGCCATAAATCCGGAGGAGGTGCAAACCATGATTCCACCGGCAATGGAGACTCCAAGAAATCAGGA
ATTGGAGCTGGTGCTATAGCAGGGATAATCATTTCATTACTAGTAGTTACAGCTCTGGTTGCTTTCTTCTTGGTCAAAAGAAGAAG
AAGATCAAAGAGATCATCATCATCATCTATGGACATTGAGAAAACAGATAACCAGCCTTTCACTCTTCCTCCAAGCGACTTTCACG
AAGACAATTCTATTCAGAGTTCTTCATCAGTTGAGACAAAGAAACTTGATGCTTCCTTGTCTATTAATCTCCGACCTCCACCAGCT
GATCGATCATTCGATGATGATGTTAAGCCTATAGTTGTCAAGAAATCCACCGTGTCTGTTCCCTCGAATGTGAGAGTTTACTCAGT
TGCAGATCTTCAGATTGCTACTGCCAGTTTCAGTGTTGATAATCTTCTTGGAGAAGGGACTTTTGGAAGAGTATACAGAGCTGAGT
TTAACAATGGAAAGGTCCTTGCTGTGAAGAAAATTGATTCATCTGCTCTTCCACATAGCATGACCGATGATTTCACCGAAATAGTA
TTGAAAATCGCCGTTTTGGATCATCCAAATGTGACAAAGCTTGTTGGTTACTGTGCTGAGCATGGACAACATCTCCTGGTCTATGA
GTTCCACAGTAAAGGATCGCTGCATGACTTGTTACACTTATCAGAAGAGGAAAGCAAAGCATTGGTGTGGAATTCACGAGTCAAGG
TTGCTCTTGGAACTGCACGTGCACTAGAGTACCTGCATGAAGTTTGTTCGCCATCTATAGTTGACAAGAACATCAAATCAGCTAAT
ATTTTACTTGATTCCGAGATGAATCCTCACTTATCAGATTCAGGTCTCGCAAGCTTCCTCCCCACAGCAAATGAGTTACTAAACCA
AACCGATGAAGGGTATAGCGCACTTGAAGTATCAATGTCAGGTCAATACTCTTTGAAGAGTGATGTTTACAGTTTTGGAGTAGTGA
TGCTTGAACTTTTAACCGGGAGGAAACCATTCGACAGCACAAGATCAAGATCTGAACAGTCACTGGTTAGATGGGCAACACCACAG
CTTCATGACATTGGTGCTTTAGGCAAAGTGGTTGATCCAGCTCTTGAAGGACTTTATCCTGTTAAATCTCTCTCTCGATTTGCCGA
TGTTATTGCTCTCTGCGTCCAGCCGGAGCCAGAGTTTAGACCACCAATGTCTGAAGTTGTGCAGTCACTGGTTGTGTTAGTGCAGA
GAGCTAACATGAGCAAGAGAACTGTTGGAGTTGATCCAACACAGCGGTCTGGTAGTTCTGAGACAACCAACGATTACATGTAAATC
TGTCACCACAGAAAGAAGAGAAAAAAAAAGAACACTTTGCTCCATATGGATGAAGTCATTGTTTTATTGTAATATGTTTGATAAAC
CTTTTCACAGTATATTATCCATTGTATTTTGTTGTAATATGTTCCAAATTTGTAGTTTTTAGATCTTTGGCATGAACAATATTATT
TCTGATAGTGTGCACTACTTTTTGCTGCAGGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB20817 putative leucine-rich repeat transmembrane protein kinase [Isatis tinctoria]26916e-302
NP_175777 STRUBBELIG-receptor family 6 [Arabidopsis thaliana]25975e-291
NP_001077716 STRUBBELIG-receptor family 6 [Arabidopsis thaliana]25851e-289
XP_002891770 hypothetical protein ARALYDRAFT_474507 [Arabidopsis lyrata subsp. lyrata]25634e-287
XP_002885038 hypothetical protein ARALYDRAFT_478852 [Arabidopsis lyrata subsp. lyrata]22651e-252

Swiss-Prot top hits (Blast detail)Scoree value
Q9C8M9 Protein STRUBBELIG-RECEPTOR FAMILY 626213e-295
Q9LUL4 Protein STRUBBELIG-RECEPTOR FAMILY 723005e-258
Q6R2K1 Protein STRUBBELIG-RECEPTOR FAMILY 513014e-142
Q6R2K2 Protein STRUBBELIG-RECEPTOR FAMILY 411832e-128
Q6R2J8 Protein STRUBBELIG-RECEPTOR FAMILY 810301e-110

TrEMBL top hits (Blast detail)Scoree value
Q079I0 Leucine-rich repeat transmembrane protein kinase26914e-302
C0LGH0 Leucine-rich repeat receptor-like protein kinase (Fragment)25973e-291
A8MQH3 Uncharacterized protein At1g53730.225858e-290
B5X583 At3g1435022505e-251
C5WVR0 Putative uncharacterized protein Sb01g04501018582e-205

Arabidopsis top hits (Blast detail)Scoree value
AT1G53730.1 SRF6 (STRUBBELIG-RECEPTOR FAMILY 6); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase26222e-296
AT1G53730.2 SRF6 (STRUBBELIG-RECEPTOR FAMILY 6); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase26105e-295
AT3G14350.2 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase23013e-259
AT3G14350.1 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase23013e-259
AT1G78980.1 SRF5 (STRUBBELIG-RECEPTOR FAMILY 5); ATP binding / kinase/ protein serine/threonine kinase13013e-143

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
213  50%
 
191  17%
 
122  33%

Unigene MembersMember information