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Information for unigene UN08783

FASTA Sequence
Unigene ID: UN08783Length: 1727 SSR 
GGCAAAGCACTTATGAGCATACATACATACATAAACAAGTCATATACAATCATTTTGTTTTTAACTTTTTACACTATAGTCTCCCT
GCATTTTTCAACTACCAAGACAAATTCATGGAACCCTGATCTGTGTAACGCCCTGAAGCAGCAGAAACCCAACTCGGATAAATGTT
TTTTTTGTCAGAGAACTATATCTCTGAACAAGAATGAAGCTTCCTAAAGGCCAAAAAAAACAGATTGAATCCCAAGAATGAATGAT
TTGCTTACAATACTCATCAGTTTAATGTCTTCTCAAACCCCAGAGAGTGTAGTAGTCTTTGTTTTTCACAGTTTATGACTGAGAGA
ACTCTCCTCCATAAGTCAAAAAACCCTTTCTTGTTTGATTTTGTTTGCCCCATGTGCATCTACTTTGTTTACCTTTTTAAAGAGAG
AATCCTTCAGTAGCTTCTGGTTGGGGTGAGTGGGTCGTAGTCATAAGCTTCACCAGCTTTGCAAACCTCCCTTTTACACGCCGTCT
CACATCAGCTCTTGCTTTCCGAGAAGCATACCTCACTGTCTTATCAAACCTACGAGCCTTCTTTTTCTCCTTGTAACGCATGACCG
CGTTATTACGTGTCACTGACTGTGAGCAAGCATTGTTATCCTGCGATGTTTGAGGATACCATGGTGGCTCGCCTGAGAGCTGCATG
GAAGATGATGCACCACATTCTTGAAAATCACCAGCACTGCTGTCTCCTGTGACTCCAGAGAAAGATATGTTGTTGGAATGTGCTGG
CTTCGATGTGAAGCAGATGATCGGCTCGGTCTTCGAACTCATGAAAGAATCATCATTGCTCTCAGCTGGCTGCACCAGATTCCCTC
CCTCAGGAGCTGCTGCTGCTGCTGCTTGATGATGCTTCTGGAAAAGACAATCGATTCCACTTTGTCCAAAGAGCTCTCCAGAGGTG
TTAAAGGCTGTCCCAAAGAGCTCTTCATAGTTCTCAAGTGCCAAGTCAACTTCATCCATACCCAAGTTATCATAAAAGTCGTCTTC
ACACACTCCAACATCCTTAACAAATGATGAGTTTGCATGTGCTGCGAAACTTGTTTCAGGCCTTGAAGAGGAGCCAACGACGACAT
CTTTCTTATCCTCATTGCAGTTTTGGTTGGTCTGACCATCATCGTCTATATTCATTATACCCATTTCATGTTCACAAACAGATTGT
CCAGCTAAATCTGAACAGAAAGACCAGATAGAGGCAAGCTCCGAGCTTGAAGGGCAACCAGAATAGCAGCTTATGGTTTGTCTCTT
ATGATGATTTGTCGAAGAATTGTTGTTGTTGTTGTGGCCAGACCAGTCACAGTTTTGACAGAGTGAAGCCCTTTCTTCAACACACC
TGACTGTAGCAGGCTGCGCATTGCATCTCTCACAGACAAGCGTCCTAGAATGTCTTTTGGACAATGCATTAGCTGAATGAATACTC
CTGTCACAGGAGAGGCAGAGACACGCTGCATCGGACCGACAGTACACCATTGATCTTTGTTCACCGCAAAAGTCACACATGTAACC
CATCTTTAATCACTCACTACGACCAAATCCAACTTTGAATTATAATAACAAGATCTTCTGAACTATCTTCTCAAGTTCAACCAATA
AAATTTAGAGACAAACACACACAGATCCTTGGAAACAGAGCTGATTATCCCACAACGTTCTCTGCTTCTCTCTTCTCTCTTCTCTC
TTCTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63401 B-box type zinc finger protein [Brassica rapa]16323e-179
NP_187422 zinc finger protein CONSTANS-LIKE 9 [Arabidopsis thaliana]15553e-170
XP_002882541 hypothetical protein ARALYDRAFT_478095 [Arabidopsis lyrata subsp. lyrata]15501e-169
NP_199636 zinc finger protein CONSTANS-LIKE 10 [Arabidopsis thaliana]12246e-132
XP_002865623 zinc finger (B-box type) family protein [Arabidopsis lyrata subsp. lyrata]11834e-127

Swiss-Prot top hits (Blast detail)Scoree value
Q9SSE5 Zinc finger protein CONSTANS-LIKE 915551e-171
Q9LUA9 Zinc finger protein CONSTANS-LIKE 1012243e-133
O23379 Putative zinc finger protein CONSTANS-LIKE 113165e-028
O22800 Zinc finger protein CONSTANS-LIKE 143102e-027
Q9C7E8 Zinc finger protein CONSTANS-LIKE 152961e-025

TrEMBL top hits (Blast detail)Scoree value
A1A6H1 AT3G07650 protein15552e-170
A5X2R6 SLL2 protein9531e-100
A5X2R7 SLL2 protein9361e-098
A5X2T0 SLL2 protein9305e-098
A5X2S9 SLL2 protein9224e-097

Arabidopsis top hits (Blast detail)Scoree value
AT3G07650.1 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding15559e-173
AT3G07650.2 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding15559e-173
AT3G07650.3 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding15559e-173
AT3G07650.4 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding15559e-173
AT5G48250.1 zinc finger (B-box type) family protein12242e-134

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  40%
 
111  20%
 
212  40%

Unigene MembersMember information