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Information for unigene UN08798

FASTA Sequence
Unigene ID: UN08798Length: 922 SSR 
GGCTGTCTCCGATCTATCACAAAGGAGAGAATAGGGGAAGTGCCAAAATGAGTAAGCTCCAGAGTGAAGCAGTGAGAGAGGCGATA
TCGTCAATCATCACTCACTGCAAGGAGACAAAGCCTCGCAAGTTCACCGAGACAATCGAGCTCCAGATTGGTCTTAAGAACTATGA
CCCTCAAAAGGACAAGAGGTTTAGCGGTTCCGTTAAGCTGCCTCACATTCCTAGGCCTAAGATGAAGATTTGCATGCTCGGTGACG
CCCAGCACGTTGAAGAGGCTGAGAAAATTGGGTTAGAGTCTATGGATGTGGAAGCTCTTAAGAAGCTGAACAAGAACAAGAAGCTT
GTTAAGAAGCTAGCTAAGAAGTTCCATGCTTTCCTTGCTTCTGAATCGGTCATCAAGCAGATTCCCCGTCTTCTTGGTCCTGGTCT
CAACAAGGCAGGCATGTGTTTAAATCTTCCCCATTACTTTTTAATCATCATAGTCTCCATATGATTATATTATCCCTTGACATTTT
TTGAGAAAAAAACAAACAAACAGGAAAGTTCCCAACTCTTGTCAGCCACCAAGAGTCTTTGGAATCCAAAGTGAATGAGACAAAGG
CAACGGTGAAGTTCCAGCTCAAGAAGGTTCTTTGCATGGGTGTCGCTGTTGGAAATCTCGGCATGGAGGAGAAGCAGATCTTCCAG
AATGTTCAGATGAGCGTCAACTTCCTTGTTTCCCTCTTGAAGAAAAACTGGCAAAATGTGAGGTGCTTGTACTTGAAGAGCACAAT
GAGTCCACCCACCCGTGTTTTCTAAGATTTTTGTTTTATCTTTTAAGGTATCATAAGAAATTTGATTTTCTTTTGTCATGAGCCTT
CTTCTTCTTCTTGGATTACTTCCAGAACTCTGTAGGATGATCAAGATTTTGTTTAAAGACAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197636 60S ribosomal protein L10a-3 [Arabidopsis thaliana]6615e-067
ACJ83898 unknown [Medicago truncatula]5925e-059
ACJ85893 unknown [Medicago truncatula]5916e-059
BAD09090 putative 60S ribosomal protein L10A (RPL10aC) [Oryza sativa Japonica Group]5872e-058
ACJ84191 unknown [Medicago truncatula]5853e-058

Swiss-Prot top hits (Blast detail)Scoree value
P59231 60S ribosomal protein L10a-36612e-068
Q8VZB9 60S ribosomal protein L10a-15789e-059
P59230 60S ribosomal protein L10a-25644e-057
Q963B6 60S ribosomal protein L10a4613e-045
Q9VTP4 60S ribosomal protein L10a-24552e-044

TrEMBL top hits (Blast detail)Scoree value
B7FGL9 Ribosomal protein5923e-059
B7FMB0 Ribosomal protein5914e-059
Q6ZJ04 Ribosomal protein5871e-058
B7FHG2 Ribosomal protein (Fragment)5852e-058
B4FN28 Ribosomal protein5843e-058

Arabidopsis top hits (Blast detail)Scoree value
AT5G22440.1 60S ribosomal protein L10A (RPL10aC)6612e-069
AT5G22440.2 60S ribosomal protein L10A (RPL10aC)6612e-069
AT1G08360.1 60S ribosomal protein L10A (RPL10aA)5832e-060
AT2G27530.1 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome5699e-059
AT2G27530.2 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome5699e-059

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  50%
 
112  50%

Unigene MembersMember information