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Information for unigene UN08800

FASTA Sequence
Unigene ID: UN08800Length: 564 SSR 
GGGATCGTGGGTTTCATCTTCGTAGTCGCCTTCGAATTCGCAGAGAGAGAGAGAGGAAAAGAATGAAGGTGAGATCATCTGTGAAG
AAGTTGTGTGAGTTTTGTAAGACAGTGAAACGCCGTCGACGTGTCTATGTTATTTGTTCGTCCAATCCTAAGCACAAGCAAAGGCA
GGGATTCTGCTCCATTGCTCATGATGGAATCATTCCTCCTCCCTTGTTTTCGGAGTCGGTTGCTAATCAGGAGGTGGTGAGGATGC
CTGGCCAGGGAGTATCAGCTGGTCTCGCATCGCTCTTACACAAAAGGCCTGAGCCAGCAGCGGTTTTCGGATGGAGGTCAGGTCTT
GCATCAATTCTCTTCAAGCAAGGGAATTAGCAAAGTTAAAACCAGCATTTAATATTTTGCATTTTCTCAAGTTGTAATCCAAAGTT
TGGTTCTCAACACATTTACTTTGGTCAGTTGTAGGCTCTTCTAGACCCCGTTTGATTTGCTTGCCCTTATATCTTGAATAAAGAGA
TAATATTAAACTTGAGTATTTTACTTTTTTTAGATTTTCCAGTGAAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871926 ribosomal protein L36 family protein [Arabidopsis lyrata subsp. lyrata]4594e-044
NP_197518 Ribosomal protein L36 [Arabidopsis thaliana]4578e-044
3BBO Chain 6, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome4452e-042
XP_002285234 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]3171e-027
CAN71764 hypothetical protein VITISV_039227 [Vitis vinifera]3116e-027

Swiss-Prot top hits (Blast detail)Scoree value
A5VLI2 50S ribosomal protein L361582e-010
B2G8V5 50S ribosomal protein L361582e-010
Q035A6 50S ribosomal protein L361572e-010
B3WAJ5 50S ribosomal protein L361572e-010
Q03PY0 50S ribosomal protein L361546e-010

TrEMBL top hits (Blast detail)Scoree value
Q8W464 Ribosomal protein L364575e-044
A5AX15 Ribosomal protein L363115e-027
A9P840 Ribosomal protein L362919e-025
B9IMZ0 Ribosomal protein L362919e-025
B9HAK1 Ribosomal protein L362792e-023

Arabidopsis top hits (Blast detail)Scoree value
AT5G20180.1 ribosomal protein L36 family protein4583e-046
AT5G20180.2 ribosomal protein L36 family protein4583e-046
ATCG00760.1 encodes a chloroplast ribosomal protein L36, a constituent of the large subunit of the ribosomal complex1359e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  100%

Unigene MembersMember information