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Information for unigene UN08815

FASTA Sequence
Unigene ID: UN08815Length: 1583 SSR 
GGATCTTAAAAGAAAAAAACCACTCAGCTCTCCGCACCATGTATAGTGGGAAGAACTCTTTTTCGAATCTGAACGTCTTTTAAGCT
CAAAAAAGACGAGCATTCCCCAGAAAGACATCCTGTCACCTAATCCCCGGAACTCGAGGAAGAAAGAACCCAGATATGAACAGAGA
TTGGGTTTTCTAAAGGTTCCAACTCTTTTTCTTGCCCAGATTTAACAGAGGAGCGCGTTCTTTCAACAAAATAGGCCATCTCTCTC
TTACTTGTTGTCTTGCTGAGTGTTTCTCTTTCAGTGTGATTCTAAAGTACAGTATTAGATACAGTGAGGTCCTTTTTTAGTTCTAT
TGGATCTTGAGTTGTTTTGTTCAAATAAAGGTCTTATCAATGTCTGTAAATTAGATATTCCTAGGAATTAAACATCTACGTGAACC
TTTTGTGGTCTTGTGATCCTGTCTTGATGGGTAAAGAGAATCAGTTGGAGACAGCAAACTGTGGAGTCAATGATCACGATTGTCCA
CCGATCAAGAACGAGGAACTAGCAGCCGTGGCGCGTTACAGTACAGACAGTGACTCAGGGTTACCGACTTGTCGTGTATGCCATTC
TGCAGAATCCGACAAACGAGGAGATGCTGCCTTAGGGTTCTTGGGGATCACTCCTACCGTTCTTTTTCCAGAAGCTCTTAAAACCG
AAACAGTTGATGATGATGATGATGATGATGATGTTGCCAGCAAAGCTACAGAGGCTGCTGAGCAGAAGAGTTCCATCGTCAATGAT
ATCGAAATGGGAATGGTGCAGCACCAGGATCCTTTGATTGAACTTGGATGTTCTTGCAAAAACGAGCTTGCTTTGGTACACTACGC
TTGCGCGCTCAAATGGTTTCTCAACCATGGATCAACCGTGTGTGAAATCTGCGGTATAGCTGCTGAGAATATAAAAACAGCTGACT
TCAACAAAGTGGTCATTGCCTTGAGAGATTACTCGGCGCTGCATACAGATTCAACCATAGATACAGATGAAGCTGCTGGCATTAGA
AGGCAACGACTAAGTGAGATATCTTCATGGTTTGGCCCCCATGCCCTGAATAATAACAATAACAACAGCAGTAGCTTTGCTGCAGC
TTCTCAGGCTATGCCTGAGCAACCTTTAGGTGCTGTGAACTTTGGGGTCTTGCCTATGGAGAACCGTGCGACTAAATGGGCTGTGG
AAGGTACTGGGATTCTACTTGCTACCGGTTTGCTCACTGTTACTTTGGTCTGGATCATTGCTCCTCGTGTTGGAAAGGAGACTGCT
AGGAGTGGACTTCATATCCTTCTTGGTGGTCTATGTGCTTTAATAATAGTCATCTTCTTCGGATTTGTTGTGCTCACTAGGATCAG
GTATGGTCCCGCACGCTACTGGGCAATCTTGTTCATCTTCTGGTTTCTTGTGTTTGGTATCTGGGCTTCTCGTTCCAGTTCTCACA
ATAACTCTTGAATCCATCATCACCTCGCTGCTCTCTCTCTCTCTAAAGTCTTTGTAATCTTACAAAAATGTACATTTGTTTCATCA
AAAGATAAATAAGCTCATGCTCATTGATTATGATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864866 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]7183e-073
NP_201183 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]7093e-072
XP_002871357 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6458e-065
NP_568206 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]6422e-064
AAL14416 AT5g63780/MBK5_26 [Arabidopsis thaliana]6422e-064

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GUG6 At5g637807092e-072
Q93ZD2 AT5g63780/MBK5_266421e-064
Q9C5A2 At5g087506421e-064
B9H4N8 Predicted protein5944e-059
B9HF63 Predicted protein5802e-057

Arabidopsis top hits (Blast detail)Scoree value
AT5G63780.1 SHA1 (shoot apical meristem arrest 1); protein binding / zinc ion binding7091e-074
AT5G08750.1 zinc finger (C3HC4-type RING finger) family protein6426e-067
AT5G08750.2 zinc finger (C3HC4-type RING finger) family protein6426e-067
AT5G08750.3 zinc finger (C3HC4-type RING finger) family protein6426e-067
AT2G34200.1 zinc finger (C3HC4-type RING finger) family protein1515e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  25%
 
113  75%

Unigene MembersMember information