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Information for unigene UN08840
| FASTA Sequence |
| Unigene ID: UN08840 | Length: 598 |
SSR | SNP | GGATAAGCATCTGGAGATTCGACAGAGCTACCCGAGAGAGAGAAGAGAAGAGAAGAGAAGAGAGAAGATTAAGCAAAAGCGATGGG
TGTAGAGAAGCAAGTCATCAGACCCGGCACTGGTGCCAAACCCGCTCCAGGTCAAACCGTCACCGTCCACTGCACTGGATTCGGGA
AAGGTGGTGATCTTTCCCAACAGTTCTGGAGTACAAAGGACGCTGGGCAAAAACCTTTCTCCTTCCAAATCGGTGAAGGTGCTGTC
ATCAAAGGATGGGATGAAGGCGTTATGGGAATGCAAATTGGAGAGGTTGCTCGCTTGCGGTGCTCACCGGATTACGCATATGGTCC
TGGTGGATTTCCCGCGTGGGGAATCCAGCCAAACTCGGTTCTCGACTTTGAAATCGAAGTACTCAGCGTGCAGTAATGCTCTCTCT
ATTGACAAAAGCACAACAAAACTTATGTGGTGTTTACCCTTTTTATGTTTATCGCTTCGGGGATCTTTGTTCAAATAAAACTTTGT
GATGTCACTCTTGTCAGTACTTGTCTAAACTCGGTGGACAACGTTCTATCTTAAATAAAAGACCCCCGTTACTCTTGTTCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866611 FK506-binding protein 12 kD [Arabidopsis lyrata subsp. lyrata] | 574 | 2e-057 |
| NP_201240 Peptidyl-prolyl isomerase FKBP12 [Arabidopsis thaliana] | 557 | 2e-055 |
| AAM60880 immunophilin [Arabidopsis thaliana] | 554 | 5e-055 |
| XP_002522624 immunophilin, putative [Ricinus communis] | 540 | 2e-053 |
| XP_002309877 predicted protein [Populus trichocarpa] | 531 | 2e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LGG0 Peptidyl-prolyl isomerase FKBP12 | 557 | 1e-056 |
| O04287 Peptidyl-prolyl isomerase FKBP12 | 509 | 4e-051 |
| Q4HZB8 FK506-binding protein 1 | 240 | 7e-020 |
| P0C1J3 FK506-binding protein 1 | 236 | 2e-019 |
| P48375 12 kDa FK506-binding protein | 234 | 3e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S9F5 Immunophilin, putative | 540 | 1e-053 |
| B9HED6 Predicted protein | 531 | 2e-052 |
| C6SVD3 Putative uncharacterized protein | 526 | 6e-052 |
| C6T190 Putative uncharacterized protein | 523 | 1e-051 |
| B7FFD7 Putative uncharacterized protein | 512 | 3e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G64350.1 FKBP12 (FK506-BINDING PROTEIN); FK506 binding / peptidyl-prolyl cis-trans isomerase | 558 | 9e-058 |
| AT4G25340.1 immunophilin-related / FKBP-type peptidyl-prolyl cis-trans isomerase-related | 175 | 2e-013 |
| AT5G48570.1 peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative | 162 | 7e-012 |
| AT3G55520.1 immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative | 161 | 9e-012 |
| AT3G25230.1 ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase | 160 | 1e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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