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Information for unigene UN08851
| FASTA Sequence |
| Unigene ID: UN08851 | Length: 1284 |
SSR | | CGCTTAATCGAGACAAGGGATTTCACTTTCAAAAACACAGATAAAAGGATCTTTAACAAAATATAATACAAGAGTCAAAAGCAATA
ACACACTCTGACACCCTCAAACCAAACCCGACTACTCCATATACTCTAAAACAAGAGACCAAAGACCAGCAGTCTAACAAAGTGAC
ACACATACACCCATTAAGATCTCTAGATTGATGGTGAAAGCACTTCTCCATGGTTTAGTGAGTTCTTGAAAATCAAATCGCCAGCA
CTATGATAACAATCAGGAGTACGATTCCAAAAATCACCATGAGCAAGCACATCAGAGTTGAACTCGATCTTTGTGTCTTCGAAGCT
TTTGCGAGATGAGATCTTCCTTGTGCTGTTGCAGCGTGGGAGTTATCGATGTGAGTACTAATATCATCGATCATGGTGCCTTGATC
ATGTACCAGGACAGCCAAGTCTTTGAAGATCTCGTGCACCTCACCAATTTGCTGCTGGATCTCTTGTATCCCTTGCTCTCGTTCCT
CGATGATAGCTTCATTAAATACAATCTCATTGTCCAGCAGTACAAGTTCTTGTCTTTTCGATTCCACAAGAAGCGCACGCTGCTCT
GAATGCTTATCTCCACTCACATCTATCTCACTGGATGTATAGCTAGATGGAGGAGAAGGACTGGTGAAAAGAGGAGCATAGACAGT
TTCTCTTTCAGCAGCGAGACGCTGCGCCTTTTGAAACTCTTTCAATACAGACTGAAAGTCCTTTGCAAGCTTAGCATCCACAATCT
TCTTCCTTTGATCTACGCCTCTTTGATGATCAGTTTCACTAGCTTCTCTAAGTTTAACAGACGTGTCTTTCACTAACTCTCCGATA
TGTAGTCTTGTCTTGTGCAGCTTATCTCGGAGCTCCGGGGTGTCTTTGGGAGTACCGAGAGTGTTGACCAGACGGTGGAAGCTAGA
GACGGCTGTGTTGATCTGGAACACACCGGAAGCTACGGCTTGCGTCGTGTCTTGTCTCCCTCCTCCTCCTCCGTTGATGTTACTAC
TCGAAGAAGAAGCTAACGGTCTCCCTCCTCTTCCCGCCTCTAAATCCTGAAAACTCATTTTCTCTCTCTTACTCGAGAAACCCCAC
CACGAAAGATTCGATCTTGAACGGTAACGGAGATCGAGGGAAGGAGCGAACGTGACGGTAAAATTTTCGATTCGGCGGCGGAATTC
TCTCTCTCTCTCTCTCTCTCTCCGACAGGATCAGATTGGGAAAAACGTGAATCGCGGAGAGAGAAGGTTGAGAAACGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD65159 syntaxin, putative [Brassica oleracea] | 1200 | 3e-129 |
| D71447 probable syntaxin - Arabidopsis thaliana | 1139 | 3e-122 |
| ABD65611 syntaxin, putative [Brassica oleracea] | 1098 | 2e-117 |
| XP_002870088 hypothetical protein ARALYDRAFT_493104 [Arabidopsis lyrata subsp. lyrata] | 1059 | 6e-113 |
| NP_001078403 syntaxin-23 [Arabidopsis thaliana] | 1047 | 1e-111 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A976 Syntaxin, putative | 1200 | 2e-129 |
| Q25BM0 Syntaxin, putative | 1098 | 1e-117 |
| A8MS65 AT4G17730 protein | 1047 | 1e-111 |
| B9MU58 Predicted protein | 1037 | 1e-110 |
| B9SNS6 Syntaxin, plant, putative | 993 | 2e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 1047 | 5e-114 |
| AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 1040 | 3e-113 |
| AT5G46860.1 VAM3; SNAP receptor | 968 | 8e-105 |
| AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor | 818 | 2e-087 |
| AT1G32270.1 ATSYP24; SNAP receptor/ protein binding | 567 | 2e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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