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Information for unigene UN08862

FASTA Sequence
Unigene ID: UN08862Length: 1103 SSR 
GGGGAGTTCCAATCAGCTTCAAGTGTTTTGTTCTGTCTTTGTGTGTGTGTGTTGTGTGTCAGCAAACCAAACCAAACCCATCTCTC
TCATCTTCTTACTACTTTTCTCCATTTATTATAAACCCCAAAAGCATTTGTAGTGAGTATTCTTCCATCACCTCATGGACGCCTCT
AGGGACGAGCCAAAGCCATCTGATTCCTCATGCATCGTTTCCACATCCAACACTCTTTCGTATCCAGATTCTCTTAACCTGAGCCT
AGAGCATTACAACGTCGACGCAGAAGAGGGACAAGGAGAAGATGACTGTGATCCAAAAGCAGGAAAGGAAGGTATAAGGCTCGATC
TTACGCTAGCAGAATATGATTATAGTCAACCACAGCACAATCAAGAACTCAACCTCATCGACAACTTAGACGCGAGTGAAGCCACT
CCGAGTTATAAAGGGTCAACTTCCACTGCGCAGAAGCTCTTCTCATGCAACTACTGTCAAAGAACATTCTACAGCTCACAGGCCCT
TGGTGGTCACCAAAACGCTCACAAAAGAGAGAGGACTTTGGCTAAGCGAGGGAAACAGATGGAAGCTTTCGGCCATTCATATGGTT
TTGCTCATGTCCCGTTCCACGGCCAGTATAGCAACAGATCATTGGGTATTCAGGCCCACTCAATGAGTCACAAGCTAAGTTCATAC
AACGCCTTTGGTGCTGGTGAGTATGGTCAGTTCAACTGGTCAAGGATACCGTTAGCTCAGCAACCAGCCATAGGTAGACTATCTTC
AACAGAGAGTCGTCATCAGATGATGTTTCCACCACCGTTGACTTCAACAAGTGAAAACTTCGGTAGGTTCGATGCAGGAACGATTC
CAGTAGATTCTGAAGAAGATCAGCAGAAGAACCTTGACTTGTCCCTCAAACTCTGAGATTCTTGTCTCTTCAATTGTTTTTGTTTG
TGCTGGTTTTTTGTTGTCATTGATATGTTCACCAGTATTATCCAAGGGTGTTAGTAAGTATTCTTGTGAATAATATTTTGTCTAGC
ATAGATTTATGTTGTACATGTTTCCATATTTTGTACAAATTTTCAGCTAGACATCAATGGATTTCTTCTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196658 C2H2 and C2HC zinc finger-containing protein [Arabidopsis thaliana]8678e-091
XP_002871446 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8533e-089
XP_002872142 hypothetical protein ARALYDRAFT_910560 [Arabidopsis lyrata subsp. lyrata]5102e-049
NP_197898 zinc finger protein 3 [Arabidopsis thaliana]4887e-047
XP_002272545 PREDICTED: hypothetical protein [Vitis vinifera]3704e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q39262 Zinc finger protein 35011e-049
Q39266 Zinc finger protein 72251e-017
Q42485 Zinc finger protein 12089e-016
Q39263 Zinc finger protein 41927e-014
Q39261 Zinc finger protein 21919e-014

TrEMBL top hits (Blast detail)Scoree value
Q9LEU3 Putative uncharacterized protein At5g109708676e-091
Q0WT56 ZFP3 zinc finger protein4885e-047
A5BQW1 Putative uncharacterized protein3641e-032
B8LP97 Putative uncharacterized protein2861e-023
B9SMU5 Zinc finger protein, putative2592e-020

Arabidopsis top hits (Blast detail)Scoree value
AT5G10970.1 zinc finger (C2H2 type) family protein8673e-093
AT5G25160.1 ZFP3 (ZINC FINGER PROTEIN 3); nucleic acid binding / transcription factor/ zinc ion binding4883e-049
AT1G24625.1 ZFP7 (ZINC FINGER PROTEIN 7); nucleic acid binding / transcription factor/ zinc ion binding2259e-019
AT1G80730.1 ZFP1 (ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding2088e-017
AT1G66140.1 ZFP4 (ZINC FINGER PROTEIN 4); nucleic acid binding / transcription factor/ zinc ion binding1926e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  33%
 
62  33%
 
102  33%

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