Information for unigene UN08872
| FASTA Sequence |
| Unigene ID: UN08872 | Length: 781 |
SSR | | GGTCCTCATAAATAAACATCCCCAAACTATTCACGGGTTTCACTTGAATCGTTTGATTTTCCCATTTTCCCAAAACTACCAAAACA
ATGGCCAAAGCGCCACCGTCAATCTCTCTCCTCCTCCTCCTCTCCGCCGCCGTACTTGTCACCCTCCCTGCCGCTATCTCCTCCAT
AGGCGTCAACTACGGAACTCTCGGAAACCTCCCACCTCCGACTCAGGTGGCGAACTTCCTCAAGACTCAGACTACCATAGACAGCG
TCAAGATCTTCAACGTGAATCCCGATATCATCCGTGCCTTTGCCGGAACTGGAATCTCTGTGGTCGTCACCGTCCCTAACGGTGAT
ATTCCGGCGTTAGCTAACGGGATAGAAGCTCGTCGGTGGGTTTCTGCTAATATTCAACCCTTTCATCCTCAGACAAAGATCAAGTA
CATCTCTGTCGGAAATGAGATTCTTCTCTCCGGAGATGATAACATGATCAAGAATCTTTTACCGGCGATGAAGAATCTTAACGCTG
CTTTGGTTCGTGCTGGTGTCAAAGATGTTAAGGTCAGTTTTTCTCTTCATTAATCTCCACACTTTTTTTTCTGTTTTTGGTGATTC
AATAATTAATGCTAATATATTTCGATGTCATTTATGCGTCATTATTAAATGATAATTGATAATTGGCGTGATAATGCAATTTGTTA
ATTTTTACGTTAAGAAAATAACTGAACCAATGCGTTGATTGCGCATAATAAAGTTGGAACAATCTAAAGGTAAAAATATCGCAAGT
AAAATTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878033 hypothetical protein ARALYDRAFT_485970 [Arabidopsis lyrata subsp. lyrata] | 700 | 1e-071 |
| NP_191103 O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] | 691 | 1e-070 |
| AAK76666 putative beta-1,3-glucanase [Arabidopsis thaliana] | 691 | 1e-070 |
| AAM66982 beta-1,3-glucanase-like protein [Arabidopsis thaliana] | 688 | 3e-070 |
| XP_002890613 predicted protein [Arabidopsis lyrata subsp. lyrata] | 517 | 2e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P52409 Glucan endo-1,3-beta-glucosidase | 338 | 5e-031 |
| Q9M069 Glucan endo-1,3-beta-glucosidase 7 | 297 | 3e-026 |
| Q8L868 Glucan endo-1,3-beta-glucosidase 11 | 287 | 4e-025 |
| Q9FHX5 Glucan endo-1,3-beta-glucosidase 10 | 264 | 2e-022 |
| Q06915 Probable glucan endo-1,3-beta-glucosidase A6 | 244 | 4e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94AJ8 Putative beta-1,3-glucanase | 691 | 8e-071 |
| Q9M2T6 Beta-1, 3-glucanase-like protein | 691 | 8e-071 |
| Q8L935 Beta-1,3-glucanase-like protein | 688 | 2e-070 |
| B9SXY3 Glucan endo-1,3-beta-glucosidase, putative | 462 | 3e-044 |
| Q9AVE5 Endo-1,3-beta-glucanase-like protein | 453 | 3e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G55430.1 glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative | 691 | 5e-073 |
| AT2G39640.1 glycosyl hydrolase family 17 protein | 448 | 8e-045 |
| AT5G24318.1 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | 332 | 2e-031 |
| AT5G24318.2 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | 332 | 2e-031 |
| AT3G46570.1 glycosyl hydrolase family 17 protein | 331 | 3e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
| Software error:
can't close file: No space left on device at /var/www/cgi-bin/radish/EST/search.cgi line 576.
For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
and the time and date of the error.
|
