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Information for unigene UN08876

FASTA Sequence
Unigene ID: UN08876Length: 675 SSR 
ACACACACACACACAATCTTCTCGTTCTTACACTCACTGCAGTAACTTTTTTAAACACAAATGACAACTTCATCCGAATCAACTCG
CAAGGGCCTGACCAAAATTGCCGCCAATAGAGTTCAGAAAGAGTTCATGGAGTGGCAGAGTAACCCTCCTTCTGGTTTCAAGCACA
GAGTCTCTGATAATCTCCAACGATGGACTATTGAAGTGAAGGGAGCTCCAGGAACTCTTTATGCCAATGAAACTTACCAACTTCTG
GTGGAATTTCCTGAGCATTATCCTATGGAAGCTCCACAGGTTATCTTTCAGCATCCAGCTCCGCTCCATCCTCATGTTTACAGCAA
CGGTCACATTTGCTTGGATGTTTTGTATGGTTCATGGTCGCCTGCAATGAGACTTAGTTCAATCTGTCTTAGCATTCTCTCAATGC
TCTCAAGCTCTGCTGTGAAGCAAAAGCCGAAAGACAACGACCACTATTTGAAAAATTGCAAAAATGGACGATCCCCAAAAGAAACT
AGGTGGCGCTACCATGACGACAAAGTATAACATCTCCATGTGATCGCTGTGATGTGTACTTTGATATTGTAATTAGTAACTAAATT
TGTATGATCTCAAGTCGAGTTATTGACCTGTTTCTATCTTCAAAACAAGAAGAGTTTCTCTCAGCCTTTTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568004 putative ubiquitin-conjugating enzyme E2 17 [Arabidopsis thaliana]8191e-085
XP_002869037 ubiquitin-conjugating enzyme 17 [Arabidopsis lyrata subsp. lyrata]8082e-084
XP_002327679 predicted protein [Populus trichocarpa]7331e-075
XP_002310827 predicted protein [Populus trichocarpa]7285e-075
XP_002521507 Ubiquitin-conjugating enzyme E2-18 kDa, putative [Ricinus communis]7251e-074

Swiss-Prot top hits (Blast detail)Scoree value
O23239 Probable ubiquitin-conjugating enzyme E2 178196e-087
Q9FWT2 Probable ubiquitin-conjugating enzyme E2 167076e-074
Q9FMM0 Probable ubiquitin-conjugating enzyme E2 187076e-074
P42743 Ubiquitin-conjugating enzyme 157032e-073
Q55EY8 Probable ubiquitin-conjugating enzyme E2 W3941e-037

TrEMBL top hits (Blast detail)Scoree value
B9MXK5 Ubiquitin carrier protein7338e-076
B9HFA8 Ubiquitin carrier protein7283e-075
B9S688 Ubiquitin carrier protein7257e-075
C6SVP6 Ubiquitin carrier protein7193e-074
A6MUS6 Ubiquitin carrier protein7095e-073

Arabidopsis top hits (Blast detail)Scoree value
AT4G36410.1 UBC17 (UBIQUITIN-CONJUGATING ENZYME 17); small conjugating protein ligase/ ubiquitin-protein ligase8204e-088
AT1G75440.1 UBC16 (ubiquitin-conjugating enzyme 16); small conjugating protein ligase/ ubiquitin-protein ligase7084e-075
AT5G42990.1 UBC18 (ubiquitin-conjugating enzyme 18); small conjugating protein ligase/ ubiquitin-protein ligase7084e-075
AT1G45050.1 ATUBC2-1; ubiquitin-protein ligase7041e-074
AT3G08690.1 UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase2059e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  50%
 
82  50%

Unigene MembersMember information