 |
Information for unigene UN08890
| FASTA Sequence |
| Unigene ID: UN08890 | Length: 758 |
SSR | | AAATCAAAGCGCCTAGAGAGAGAAAGTCCGACCCGGAATCTAACCCGGAAAACCGAGAAAAAATGGGCAAGGACGGTCTGAGCGAC
GGCCAGGTCTCGTCGATGAAGGAAGCCTTCACGCTCTTCGACACCAACGGCGACGGAAAAATCGCGCCGACCGAGCTCGGGATCCT
CATGCGATCGCTCGGGGGAAACCCGACCCAAGCCCAGCTGAAATCCATAACCGCCTCCGAGAACCTGACGGCCCCGTTCGATTTCG
ACCGTTTCCTGGATCTGATGGCGAAGCACCTGAAGACGGAGCCTTTCGATCGCCAGCTCCGCGACGCCTTCAAGGTGCTCGACAAG
GAAGGCACCGGGTTCGTCGCCGTGGCGGATCTGAGGCATATCCTCACGAGCATCGGGGAGAAGCTGGAGGCTAACGAGTTCGATGA
GTGGATCAAGGAGGTGGATGTGGGGTCCGATGGGAAGATCCGTTATGAGGATTTCATTGCCAGGATGGTCGCCAAGTGAGAGAGAG
AGAGAGAGGCCTTTTGTTTTAAAGTTTGAATTTTTTTTTGAAGTTTGATTTGTTTGTTGGTTCGAGCGAGTGGCCTTTGGGATTAG
TACTAACTTTGTTGTTCCCTTTCTAATGGAAATGTTGTGTTGCTGTTGATTCCCTACTTGTTTTAATCTCTCTGTTTTTAAGTAAA
GTTTCACTCTTTATGCCCAATGTGTTCACTTTTAGCTCTTTTAATGTCAAAACGTGCCTAATCTCGATCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172695 putative calcium-binding protein CML13 [Arabidopsis thaliana] | 709 | 9e-073 |
| AAF79658 F5O11.4 [Arabidopsis thaliana] | 704 | 3e-072 |
| XP_002886451 predicted protein [Arabidopsis lyrata subsp. lyrata] | 682 | 1e-069 |
| AAF19542 F23N19.18 [Arabidopsis thaliana] | 677 | 5e-069 |
| NP_176470 putative calcium-binding protein CML14 [Arabidopsis thaliana] | 677 | 5e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94AZ4 Probable calcium-binding protein CML13 | 709 | 4e-074 |
| Q8VZ50 Probable calcium-binding protein CML14 | 677 | 2e-070 |
| Q84VG0 Probable calcium-binding protein CML7 | 572 | 3e-058 |
| Q95NI4 Calmodulin | 367 | 2e-034 |
| O94739 Calmodulin | 366 | 3e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GVS4 Predicted protein | 658 | 5e-067 |
| A9P988 Predicted protein | 656 | 9e-067 |
| Q84U32 Putative serine/threonine kinase | 642 | 4e-065 |
| B9RBR8 Calmodulin, putative | 640 | 6e-065 |
| C6T4Q6 Putative uncharacterized protein | 638 | 1e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12310.1 calmodulin, putative | 710 | 3e-075 |
| AT1G62820.1 calmodulin, putative | 678 | 2e-071 |
| AT2G41110.1 CAM2 (CALMODULIN 2); calcium ion binding / protein binding | 366 | 2e-035 |
| AT2G27030.1 CAM5 (CALMODULIN 5); calcium ion binding | 366 | 2e-035 |
| AT3G56800.1 CAM3 (CALMODULIN 3); calcium ion binding | 366 | 2e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
