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Information for unigene UN08900

FASTA Sequence
Unigene ID: UN08900Length: 850 SSR 
GGAATTGTGTAGTAGTACACACTCTCAGAAATCATTTAGATCGAAACCTCTCTCTCTGTTGCAGAAATGGCGGCAGCTTTAGCTTC
CAGACTTACCAAAGGACGTTCGTTGCTTGGAGGTCTTACCAATGCTTTCTCTGGTCTTGATGAGTTCATCCAGTGGAAGCATCCTT
TCTCAGCAGCAGCAGCAGCAACAGGAGGACGTTCATTCAAATGGGAACAAGACTCAGAGTCGTGGATAACTCTGGTGCAAAGGAGG
TGATGTGCATTCAATCTCTAAGGGGAAAGAAAGGAGCAAGACTTGGCGATATCGTCATTTGTTCAGTGAAAGAGTCTGCGCAAAAA
GTTGATGTGAAGAAAGGGAAAGACGCCATACAGAAAGGCAAAGTGAAGAAAGGGAGCGTCGTGTACGGTGTGGTTGTGCGTGCTGC
GATGCAGAAAGGGCGTGTCGATGGAAGCCAAGTAAGGTTTGATGACAACGCCGTCGTTATTTTGGGGATTAAGGAGAAAAAGACAG
ATGAAAAGGGTAAGGAAAAAAAGCAGAACTATAAGGGTGGTTTTAACCAACCGCTTGGTACCCGAGTGTTTGGTCCTGTCCCTCAC
GAGATGCGCCTCAAGAAACAGCTCAAGATCCTTTCTTTGGCTCAGCATCTTGTTTGAGACTGAGAGAGACTACACCACCTATCATC
TTGTTTGAGACTGAGACTACACCACCTATTATTATCTCTTTATTATATTATGCGACTGTAATCCATTCATCAGATAGTCAGACTTC
TGTTTTATTAATTAAACTATTTGACATTTTTTATTCCCAACTCTTAACGTCTCTCAGGCAATTAGTTTTCAGTCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173200 large subunit ribosomal protein L14 [Arabidopsis thaliana]5442e-053
AAF79479 F1L3.27 [Arabidopsis thaliana]5442e-053
AAL60451 HUELLENLOS [Arabidopsis thaliana]5432e-053
AAM63894 ribosomal protein, putative [Arabidopsis thaliana]5432e-053
XP_002892957 predicted protein [Arabidopsis lyrata subsp. lyrata]3641e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q3YRL9 50S ribosomal protein L141801e-012
B8E1E3 50S ribosomal protein L141371e-007
A1A079 50S ribosomal protein L141352e-007
A7NR53 50S ribosomal protein L141352e-007
A5USH9 50S ribosomal protein L141352e-007

TrEMBL top hits (Blast detail)Scoree value
Q84JG5 Putative ribosomal protein5441e-053
Q9LNP8 F1L3.275441e-053
Q8LC24 Ribosomal protein, putative5431e-053
Q8W1X5 HUELLENLOS5431e-053
Q8RWH1 Putative uncharacterized protein At5g461602152e-015

Arabidopsis top hits (Blast detail)Scoree value
AT1G17560.1 HLL (HUELLENLOS); structural constituent of ribosome5511e-056
AT5G46160.1 ribosomal protein L14 family protein / huellenlos paralog (HLP)2159e-018
AT5G46160.2 ribosomal protein L14 family protein / huellenlos paralog (HLP)2159e-018
ATCG00780.1 encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex1324e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  50%
 
82  50%

Unigene MembersMember information