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Information for unigene UN08926

FASTA Sequence
Unigene ID: UN08926Length: 804 SSR 
GGGTACAAAATCATATATTAGGATCAAGGTTCAGATTATATATTAGGATCAAGGTTCATCAAACCAAAGCGATTGATAAAGTTACA
CGGTACTGATCTAACAACAACAATCACCAGTCTTTTCCCACACATTTGTAAAAAGTTTTAACTAAACAATAAAATCCTGAGGATGC
CAATCATCATCATCATCATCATTATCATCGATCTGTTCGTCCACAAGTAGTTTATATATCAACCTGAGGGATTCTACCACCAGCTT
GGACGATCTGCTGCTCAAGATTGAACAAATCTTGAAGCTTTGCCTTTAATGACTTGTACTCAATATCCACCTGCTGCAAACATCTC
ACACACCCTTCAAAGTTCTGAGAGTCACAACACTCCTTGAAGGTAATACAAAGACCTTTGACCCTCTTGGCACCAACACTTGAGCT
ACTACCTTTGAGTTGATGAACACTAGAACCTACCAGACTGAAATCTACGTTTCCTGTCTGATCTAGAGCTCTAGCCATGTTACCGA
TAAGCTTCTCACAGTCTTCAAAGAAGAGAGAAACAACCTCTGCCACAAAATCAGGGCTACATTCATCTTGCAGCTTTTTCAATTCA
GTGAACTGATCATCCAGAAACCCCTGGTGATAGAGAGAGATGGTGTAGTCACGGAACTGTCTCTGCAGCTGAGCGACGAGTGTGTC
CATGATGGTTGGTTACTTGTGACGATGAAGCAGAGAGAAGAAAGAGATTTGAAGTTTGATATAGGAGGAAAACAAAATGAGAAGTT
TTCTCTGAATCCTTGGACTTGAAACGCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870792 histidine-containing phosphotransmitter 3 [Arabidopsis lyrata subsp. lyrata]7743e-080
NP_198750 histidine-containing phosphotransfer protein 3 [Arabidopsis thaliana]7573e-078
BAA37111 ATHP2 [Arabidopsis thaliana]7261e-074
NP_189581 histidine-containing phosphotransfer protein 2 [Arabidopsis thaliana]6812e-069
XP_002877175 histidine-containing phosphotransmitter 2 [Arabidopsis lyrata subsp. lyrata]6623e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q9SAZ5 Histidine-containing phosphotransfer protein 37571e-079
Q9ZNV8 Histidine-containing phosphotransfer protein 26818e-071
Q8L9T7 Histidine-containing phosphotransfer protein 55983e-061
Q9ZNV9 Histidine-containing phosphotransfer protein 14121e-039
Q9SSC9 Histidine-containing phosphotransfer protein 63143e-028

TrEMBL top hits (Blast detail)Scoree value
Q67XQ1 At1g034305985e-060
B9HCL1 Histidine phosphotransfer protein5125e-050
B9IG70 Histidine phosphotransfer protein5072e-049
Q659H7 Putative histidine-containing phosphotransfer protein 35062e-049
Q659H6 Putative histidine-containing phosphotransfer protein 45044e-049

Arabidopsis top hits (Blast detail)Scoree value
AT5G39340.1 AHP3 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 3); histidine phosphotransfer kinase7589e-081
AT3G29350.1 AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2); histidine phosphotransfer kinase/ protein binding / signal transducer6818e-072
AT1G03430.1 AHP5 (HISTIDINE-CONTAINING PHOSPHOTRANSFER FACTOR 5); histidine phosphotransfer kinase5983e-062
AT3G29350.2 AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2); histidine phosphotransfer kinase/ protein binding / signal transducer4962e-050
AT3G21510.1 AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1); histidine phosphotransfer kinase4121e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  33%
 
95  56%
 
81  11%

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