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Information for unigene UN08938

FASTA Sequence
Unigene ID: UN08938Length: 782 SSR 
GGATCCACGCATAAACTCAAACTTCAAAACACAATGGCAACCATTCATCTAACGCTAGCTCCTCTCCTCCTCCTCCTCGCCGCCAT
CTTCCTCTCTACAGAGGTAACTGCTCAGCCCGCCGCTCCTGCTCCTGGCCCTGCCGGTCCCATCAACATCACATCTATCCTAGAAA
AAGGCGGTCAGTTTGTTACTTTTATCCGTCTTCTAAACACAACACAAATCGGAAACCAAATCAACATCCAAGTCAACAGTTCATCA
GAAGGCATGACCGTATTCGCACCAACGGACAACGCTTTCCAAAACCTTAAACCGGGAGCCCTAAACAAGTTAAGCCCGGACGACCA
AGTCAAGCTCATTCTTTACCATGTTAGTCCCAAGTTCTACACAATGGATGATCTTCTCTCCGTAAGCAACCCTGTCAGAACACAAG
CTACAGGCCGAGACGGTGGAGCGGTTTACGGACTTAACTTCACCGGTCAAGGGAACCAAGTGAACGTGTCGACAGGTGTCATCGAG
ACACGTGTCAGTAATGCATTGAGAAAAGAACGTCCACTTGCGGTTTACGTGGTGGACATGGTATTGTTGCCTGAAGAGATGTTTGG
AGACCGCAAGAAGATCTCACCGGTGGCGCCTGCTCCAAAATCCAAATCTCCTGCTGTCTCCGATGACTCATCAGACGACTCCTCTA
AGAAAGCGGCGGTCCGTCCGAGAGTCTGGCTCCGGGAGATGAAGCTGGATAGCTTGGTCTGGATTGTCTCTTATGTTAAATCATGT
TAATGTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199226 fasciclin-like arabinogalactan protein 13 [Arabidopsis thaliana]9241e-097
XP_002865383 hypothetical protein ARALYDRAFT_494579 [Arabidopsis lyrata subsp. lyrata]9194e-097
XP_002892185 hypothetical protein ARALYDRAFT_470362 [Arabidopsis lyrata subsp. lyrata]8755e-092
NP_563692 fasciclin-like arabinogalactan protein 9 [Arabidopsis thaliana]8721e-091
AAN60339 unknown [Arabidopsis thaliana]8684e-091

Swiss-Prot top hits (Blast detail)Scoree value
Q9FFH6 Fasciclin-like arabinogalactan protein 139245e-099
Q9ZWA8 Fasciclin-like arabinogalactan protein 98726e-093
Q9SIL7 Fasciclin-like arabinogalactan protein 66243e-064
Q8LEJ6 Fasciclin-like arabinogalactan protein 114792e-047
Q8LEE9 Fasciclin-like arabinogalactan protein 124318e-042

TrEMBL top hits (Blast detail)Scoree value
B3LF88 At1g038708728e-092
A0T2P3 Putative uncharacterized protein8423e-088
B9RVS1 Putative uncharacterized protein6343e-064
B9IQS4 Fasciclin-like arabinogalactan protein 9.26301e-063
A5BN83 Putative uncharacterized protein6192e-062

Arabidopsis top hits (Blast detail)Scoree value
AT5G44130.1 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)9245e-100
AT1G03870.1 FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)8771e-094
AT2G20520.1 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)6243e-065
AT5G03170.1 FLA114792e-048
AT5G60490.1 FLA124317e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information