Information for unigene UN08948
| FASTA Sequence |
| Unigene ID: UN08948 | Length: 1323 |
SSR | | GTACTAAGCATAAACCAATAACCAAAAACATCTATACAACGCTAACACAAGAACACATCACGGTACGGTAGCAAAATCTCATTGCG
TCAAACAACTTTGCAAGCAAATACATTGAACTACTCAAACACGTCAATTAGCTTTCAGAATTTGCACTTAAAAACTTATTTATCAC
TCTCGTTCAGTCTTCTTGGCCTTGGTTGTCGTTGTCTCTGCAACTACGCAACAGTCTTGGTGTCTGAAGCAGCCTATGAGGTGGTC
GTTTGTAAGGCCAGCTGCTTGCATGAAGGAGTAAATAACCGTTGGACTCACGCTGCGAAAGCCTCTGCGTACAAGATCTTTGCTTA
TAAACTCGGCCTTTGATGTCTTCACAGGGACTTGTCGCTGATACCTGAACTGGCTCTGTGTAGGCTTGTTGCTCACAAAGTTCCAC
ATGTACTTCTTAAATGATCCATATTCAGCTATGGTCTTGCGCACCTGGCGTGCGTTATCGAGGATTGACCTTAGCTTGACCTCTGA
GAGTAAGGAAATGGCAGAGGTTACCGTTTTCTCGTTGAGTTTGGAAACAGCAACTGGATCGAAGTCCATGAAAACTTCCCTGAGTA
GTTGCCTTCTGGAGAGAATGTCAGTCCAAGAGAGTTCGGATAGAGCACCAGAGAGACATAATAACTCGAAAAGCTTCTTGTCTTCA
TGAACAGGAACTCCCCATTCTTCGTCGTGGAAAGCAACATAACACGGGTCAGACTTAGGAGTGATCCAAGCACATCTTCTCCGACC
GTCAGCGAAACAATCTCCGTTACTAACACCACCACCAGCAGCAGCAGCAGCTTTATCTTCTTTCTCATCAACCTGCTTCCTTCTCG
CCACCACCACGGCAGACGTAGTACCAACAGAAGAGACAGACCCGCTTCGCCTCACAACAGCCTTCTTACGGCTAGAAGAAGACGCC
ACGCTCAAATGCGACGACTCGCAAGAAGACGAGGCGTCAGAGGAATACGAAGCAGTCATGGAGGAGGCACCACTGTTCCGTCGTCT
GAGTAGCGAAGAGCAGAGAGAGGAGCATTGCTTCAGAGTCGTCGTCGGCGAAGCAGGAGGATCTGGTTTCTTCTTCGTTTTCTCAT
CTTTTGACTCGATGGTGTTGGTCGTCGTCATCTTCTTACTATTCTCCAGCTTCATCCCCGGTGGTTTCCTCTGCTTGTTCCCGGTC
GGACCGAGAACCGATCGGAAGTCTCGCTCATCGGAATTCACGGACCGGAATCGAGGTGGAACCGACATTGAACCGATTCTAAACCG
AAAGAATAGCAGATCTAAACACTGAAAAGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892889 methyladenine glycosylase family protein [Arabidopsis lyrata subsp. lyrata] | 997 | 9e-106 |
| NP_173049 DNA glycosylase-like protein [Arabidopsis thaliana] | 987 | 1e-104 |
| XP_002887808 hypothetical protein ARALYDRAFT_477160 [Arabidopsis lyrata subsp. lyrata] | 958 | 3e-101 |
| NP_178200 methyladenine glycosylase-like protein [Arabidopsis thaliana] | 957 | 4e-101 |
| XP_002324538 predicted protein [Populus trichocarpa] | 784 | 5e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P05100 DNA-3-methyladenine glycosylase 1 | 380 | 1e-035 |
| Q7VG78 Probable GMP synthase [glutamine-hydrolyzing] | 372 | 1e-034 |
| P44321 DNA-3-methyladenine glycosylase | 314 | 6e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S9N7 At1g15970 | 987 | 9e-105 |
| Q9SAH6 At1g80850 | 957 | 3e-101 |
| B9IMD8 Predicted protein | 784 | 3e-081 |
| B9HB20 Predicted protein | 781 | 7e-081 |
| B9STQ9 DNA-3-methyladenine glycosylase, putative | 769 | 2e-079 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G15970.1 methyladenine glycosylase family protein | 987 | 5e-107 |
| AT1G80850.1 methyladenine glycosylase family protein | 959 | 9e-104 |
| AT5G57970.1 methyladenine glycosylase family protein | 690 | 1e-072 |
| AT5G57970.2 methyladenine glycosylase family protein | 690 | 1e-072 |
| AT1G75090.1 methyladenine glycosylase family protein | 607 | 6e-063 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Software error:
can't close file: No space left on device at /var/www/cgi-bin/radish/EST/search.cgi line 576.
For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
and the time and date of the error.
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