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Information for unigene UN08960
| FASTA Sequence |
| Unigene ID: UN08960 | Length: 759 |
SSR | | TTTTTCCAACAAATAGACGAGCTAGATATATAGCTCTCAGAATCAGTTCAGAGATGAGCTTTTACTTATGCAGAAATAAACACTTA
AATGAATCTCACAGCCTTCAGGAATTCATTATTGAAAACAACAGAGAAGATTTGTCAACAACTTGTAGCAAAACATTTTGGCCAGA
ACGACAAAGGCTGTGTGTTTTTATATATAACAACTAGCAAGTGACATCCACAAGACTAGACCAGAGCAGAGATGTAATCTGTCAGT
TTTTCCTTCCTTCCGACAAGATGATGTGGTATCCGTGCGTAGATTTGAAAGGTGCACTAGTGACACCAACAGGTGTGTTGAAGGCG
ACATCTTGGAAAGGACCAGCCATCTTTCCTCTTGGGAACCATCCAAGATCTCCTCCTTTTTTCCCTGATGGGCACTCCGAGTACTC
TGCTGCAATCTTTGCAAACTCAGCAGGAGGAACCTTGTCTCCGTTGCTCAACCAGCCATCCTGCAACTTCTTGTATGCCTCATTGA
TCTTCCCTTGCTTTTCGCACAAAACATGTCTCGCTTTGACATAAGTACATGTTCCTAGACCATCAGCAGCTTTCCCAGCTTTGCCT
TTACCCTTGGAGGAGGCTTCATCACTCCCACCACCAGCTTGCTTTCCCTTACCCTTCCCACCAGCTTTACCGTCTTTCCCCATATC
TCCTTCCTAAACTCTTTGAGGTTCTTCTTCTTCTTCTCTATGATTGAACGATCGAGCAAAGAGTGAGCGAG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002893399 peptidyl-prolyl cis-trans isomerase PPIC-type family protein [Arabidopsis lyrata subsp. lyrata] | 732 | 2e-075 |
| NP_564250 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Arabidopsis thaliana] | 728 | 6e-075 |
| ACU23475 unknown [Glycine max] | 701 | 8e-072 |
| ACJ86035 unknown [Medicago truncatula] | 700 | 1e-071 |
| XP_002514732 rotamase, putative [Ricinus communis] | 693 | 7e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A4IKU2 Foldase protein prsA | 159 | 3e-010 |
| C5D6L9 Foldase protein prsA | 157 | 4e-010 |
| Q7NQB0 Chaperone surA | 156 | 6e-010 |
| Q5L289 Foldase protein prsA | 154 | 1e-009 |
| P0A9L7 Peptidyl-prolyl cis-trans isomerase C | 152 | 2e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FE18 Putative uncharacterized protein | 728 | 4e-075 |
| C6TKN5 Putative uncharacterized protein | 701 | 5e-072 |
| B7FMQ2 Putative uncharacterized protein | 700 | 7e-072 |
| B9RLW3 Rotamase, putative | 693 | 5e-071 |
| B9HI98 Predicted protein | 690 | 1e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G26550.1 peptidyl-prolyl cis-trans isomerase PPIC-type family protein | 734 | 5e-078 |
| AT2G18040.1 PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1); peptidyl-prolyl cis-trans isomerase | 123 | 4e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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