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Information for unigene UN08976
| FASTA Sequence |
| Unigene ID: UN08976 | Length: 1322 |
SSR | SNP | ATCAAAGTGCGATGTAAGTGGTGAACAAGATGATGATATCAGCAAAACAACAGTTATATATTCGAGACAAAAAGAAGAGGGAGATG
AGTATACATTTTACTTGACCAGGCAATTGAAAATTTATTTGTAATCGTTTTATTTTCCAAGTGTTGTCTATAATCTACTGGTAAGT
TTCTTTAGTTGGCCCGATCAGATGTCCAACTGTTCCCACACATGAAAGAAAAGAACATGACATACAATAAGCGTTTGTCCTCGTGA
CAATCTGGCTGCCTTTATACGTCACCCATTTTTATTCTAATCATGTTTTATTAGCACCATGATGATATTTATAAATTCGTAAACGT
TTCAAATTTTTGGATACTAGGATAATTGCTTTGGTACATTGCCACATATATCCGTTTTCCTACTCCAACAGAGATCAATCAAAACA
CAAAGTGATCTGTGCACAACAAACTCAACTATCCTTATGATATTCCACAAAAAAAAAAAAAAAATGAAAATGCGTTCTTCCATTTT
TAACCAATCGACTCTGCTTATCCCCTCTTTCAAGGGGGGGATGTGTTACTCTATATAGCAAGGTCCTTCAGACCAAGTCTTTAAAT
GAGTTTCTTCTTGTGGAAGTATCGCTTCAGGTACCATATCTGTGAACCCGCAACAGAAAGGCAAACCCCGAGTGACATTATACTGA
ACCAAGCCACTCTCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTTATATAATTGATGTTCTCACGAATC
GACTGCACTAACCCGTCAAGTCTCCTCAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCCAATCTTTAGC
TGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGATTAACTTGCGGACGACTGGAATCAACCCAGAAGCAAGCCAAGTAAT
TCCCAGTTTCTTGAGTTGTGAAGGCAAACTGACCATGCGTCACATTGTCTTGGTGATGCAGATTGTTCCCATAAGGAGATGTTACC
TTAGAAGAAATAGTAGCCGTGTGTTCAGGATCATGCTCATCGACGACGTAGTAATCAGCCAAAACGACGACGTTGCTCTGTATCTC
CTCCGAGACGCACTTAGTCCCTCCCGTCGGCGGAATCGTCAACCATATGGCTTCGCCGTGGTTAACCGTCAGCAGGAACAGCACCG
CCGCCAGAATCGGCGAGAAAGCGACGAGTCCTCCTCTAATCGACATCGTGAGAGTTTACGACGATCTTCTTCTTCTTCTCTTTTAT
TACCTCTCGAAGTCCAATTAAACTCAAGGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893188 emp24/gp25L/p24 family protein [Arabidopsis lyrata subsp. lyrata] | 960 | 2e-101 |
| NP_173608 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana] | 946 | 7e-100 |
| XP_002513789 Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis] | 764 | 1e-078 |
| ABK94032 unknown [Populus trichocarpa] | 715 | 5e-073 |
| XP_002302245 predicted protein [Populus trichocarpa] | 715 | 5e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q63584 Transmembrane emp24 domain-containing protein 10 | 336 | 2e-030 |
| Q9D1D4 Transmembrane emp24 domain-containing protein 10 | 330 | 9e-030 |
| O35587 Transmembrane protein Tmp21 | 325 | 3e-029 |
| Q5E971 Transmembrane emp24 domain-containing protein 10 | 321 | 9e-029 |
| Q28735 Transmembrane emp24 domain-containing protein 10 | 321 | 9e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RWM6 Similar to transmembrane protein | 946 | 5e-100 |
| B9RJ70 Transmembrane emp24 domain-containing protein 10, putative | 764 | 7e-079 |
| A9PCC9 Putative uncharacterized protein | 715 | 3e-073 |
| B9GU57 Predicted protein | 715 | 3e-073 |
| C6SW61 Putative uncharacterized protein | 709 | 2e-072 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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