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Information for unigene UN09000

FASTA Sequence
Unigene ID: UN09000Length: 654  SNP
GGACAACCATCGGGACCAAAGAAGAAAATTCTCTCTCTTCTAGCCATTCAAAATAGTGAGAATGGGGTTGCTGAAAAAACACGAGA
AACATTCAAAGCCGACGTTTAAGGGTATATTAACGGCCATTTTAGCTACAAAGGCTGCAATATTCCTCTTGATTCTCGCCGGTTTA
TCCCTCTCTGGGACATCCTTGGCATTTATCGCCACTATGCCGCTATTCGTCGTATTTAGTCCGGTTCTCGTACCAGCAGGTATTAC
CACTGGTTTGCTAGCTATGGGTTTAGCCGTCTCGGGCGGCTCCAGTTTGACGGCCCTCAGCATCATCTCGTGGCTCTACAAGTTCT
CTAGGCGGCCGTGAGTCATACTGTATAATGGTTCTTAATTTTTATTATAGATTACAAATTAAATCTAGTTTTTTTTTGATCAAAAA
ATTAAATCTAGTTAACCCAATCTTTTTCTAGTAATAATTATTACGTGGGGATGGAAATGAAGTTTTCAAATAGCATCTTATTAAAT
GCATGTATGTCGTGGTACACAATAATGAAAAAATGTATGTGTTTTTGTTATCTACTGCTATAATATACTCTCTAAAACTATACAAG
TATTGTATATGATATCTAATAGTATATCATTTTGAAAGAAAAAAATAGTATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABK78694 oleosin-like protein [Brassica rapa]3852e-035
AAR15435 pollen coat oleosin-glycine rich protein [Sisymbrium irio]3557e-032
CAA57545 oleosin [Brassica napus]3306e-029
CAA57544 oleosin [Brassica napus]3135e-027
Q00650 RecName: Full=Oleosin-B1; AltName: Full=Microspore-specific protein I3; AltName: Full=Oleosin-B5; Contains: RecName: Full=Pollen coat protein B1; AltName: Full=Pollen coat protein B53135e-027

Swiss-Prot top hits (Blast detail)Scoree value
Q00650 Oleosin-B13133e-028
P13436 Oleosin Zm-I1896e-014
Q43804 Oleosin 11833e-013
Q96543 Oleosin 16 kDa1815e-013
Q42980 Oleosin 16 kDa1815e-013

TrEMBL top hits (Blast detail)Scoree value
A0T2P7 Oleosin-like protein3852e-035
Q6V5I3 Pollen coat oleosin-glycine rich protein3555e-032
Q39273 Anther-specific protein3091e-026
Q6V5D5 Pollen coat oleosin-glycine rich protein2911e-024
Q6V5B9 Pollen coat oleosin-glycine rich protein2883e-024

Arabidopsis top hits (Blast detail)Scoree value
AT5G07571.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: GRP20 (GLYCINE-RICH PROTEIN 20); lipid binding / nutrient reservoir (TAIR:AT5G07560.1); Has 374 Blast hits to 374 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 374; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2731e-024
AT5G07560.1 GRP20 (GLYCINE-RICH PROTEIN 20); lipid binding / nutrient reservoir2667e-024
AT2G25890.1 glycine-rich protein / oleosin1961e-015
AT5G07550.1 GRP19 (GLYCINE-RICH PROTEIN 19); lipid binding1905e-015
AT5G07550.2 GRP19 (GLYCINE-RICH PROTEIN 19); lipid binding1905e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  44%
 
71  11%
 
122  22%
 
82  22%

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