Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN09017

FASTA Sequence
Unigene ID: UN09017Length: 834 SSR 
GGGAGGAATAAAAAACATAGGTGAGTCAAGAGTCTTGAGACATCGATTGTTTGTCCGTTTTAACAAGAGAAACAGAGAAAATTTGT
CTGTAGAAAACAGAGGAAAGGGTTGAAGATGGAGGAACTTGCGGGGCTTCTGAGGATCCGAGTGAAGAAAGGGATCAATCTTGCTA
GACGTGACTCTCTAAGCAGCGACCCTTTTGTCATCATAACCATGGGAACACAGAAACTGAAGGGTCGTGCTGTGGAAAACAACTGC
AACCCTGAGTGGAACGAGGAGTTAACACTTGCCATCAAACATCCCAATGAACATGTGATTCTGACTGTGTATGATAAAGATACATT
CACATCTCACGACAAGATGGGAGATGCGCAGATCGACATCAAGCCGTTTCTAGAGGTTCATAAACTTGGTTTGCAAGAACTTCCTG
ATGGGACGGTGATCAAGAGTGTTTTGCCCACCAAAGAAAACTGCTTGTCTGAAGAGAGCAGAATCGTCTACCATAATGGCAAGATC
GTGCAGGACATGATTCTTGTCTTGAGGAATGTTGAATGCGGTGAAGTGGAGATTCAGCTTGAATGGATTGAAATTCCAGGTGGTAG
GGGACTCTGAGAAACACATATGAGATGTTTTCATGATTCCTCTATCTCTATGTGTGTGTGTGTGTGTTTGTAATAAAAGCCACAGG
TTCTGTAATAAGACAACAGGTTCTAGCTCATGCACAAGAATATATATATTTGTAGTATCTACCTGAAAATGTATTTGCAAAGTTGT
TGTACCAAACACATGTTAGCTTTACCAGCTAGGTATTAATTACAAAAGAGAATCAAGAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887330 C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]7214e-074
NP_565002 calcium-dependent lipid-binding domain [Arabidopsis thaliana]7162e-073
AAY86774 C2 domain-containing protein [Noccaea caerulescens]7162e-073
AAK25852 unknown protein [Arabidopsis thaliana]7125e-073
XP_002887329 C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]6874e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q9FVJ3 ADP-ribosylation factor GTPase-activating protein AGD123385e-031
Q8L7A4 Probable ADP-ribosylation factor GTPase-activating protein AGD113323e-030
Q8LFN9 Probable ADP-ribosylation factor GTPase-activating protein AGD133181e-028
Q5RJH2 Multiple C2 and transmembrane domain-containing protein 21584e-010
Q6DN12 Multiple C2 and transmembrane domain-containing protein 21531e-009

TrEMBL top hits (Blast detail)Scoree value
A1X1E6 C2 domain-containing protein7161e-073
Q9SSL1 F15H11.6 protein7161e-073
Q9C5M6 Putative uncharacterized protein At1g708107123e-073
Q9S764 At1g708006514e-066
O49303 At1g231405994e-060

Arabidopsis top hits (Blast detail)Scoree value
AT1G70810.1 C2 domain-containing protein7175e-076
AT1G70800.1 C2 domain-containing protein6522e-068
AT1G23140.1 C2 domain-containing protein5993e-062
AT1G48590.1 C2 domain-containing protein5322e-054
AT3G17980.1 C2 domain-containing protein5268e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
86  100%

Unigene MembersMember information