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Information for unigene UN09020

FASTA Sequence
Unigene ID: UN09020Length: 878  SNP
CCGACAACGATAAACAAAAATAATAATGTCACAATAACCAAAGTGTGAAAACAATAATGTATTATGGTTACTTTATAAAACTTTTA
TATCTTAACTATATCGTATAAGCTTAAAACAACACTTCTAAAGTAGAACAAAGAAATTAAAATTGATTTGGAAAATTAAAAAAAAA
AGCTTATTTTAGTTTGTTTTCTTGTCATCTTCTTGGTCAGTGATCTTCTTCGGATCAACAGACTCATCCTCACCTCCAAAACCAAA
CTCGTTGACACGTGTTTTGTCCACAGGATAAACCCATCTCTGGTACAAGTATATCAAGAATATCACATCATCTCGGAAGACAGAAA
GACGGTGCAGCATTGGCATTTTGATGACAAAAGCAAAGAGATCGTCGATGATGGTGTTGAGGAACTTATAAGTCATTTGCCTCCAT
GGTAGATGCGCTACTGACTTTAGCTTATAGTTGATGAACAATTGAGGACACATCATTATGAAACCAAACATGTAGACGCAGCTCGT
TAGTGAAGATAGTATCCATGAGTACCAGCTCTTGTGTCGTTCATAGGCGAGTGAATATATAGCGAATCCCGCAACAAGGAGGAGAA
GCACATAGGATAAGAATTTAATGGCCATATCATCATACTCCTTGGTTTTGTTTCTCGCATAGGATTCACGATCGTGGAACCTCAAT
CTTGGAATCATTCCACTTCGATCAATCTCTATGCGCATGGCTTTCCCTATTTTCCAGAACTCAATGCAGACGCCAACTCCAGAGCT
AGCCAGTATCATCCATGACGTGTCGTTGTCAAGCAGTAGAGGAAGATGACGAACTGACAGATGAAGTTGAGTACAACAGACTTTGC
AGACAGTCCTTCATAGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196467 transmembrane CLPTM1 family protein [Arabidopsis thaliana]10819e-116
XP_002871331 transmembrane CLPTM1 family protein [Arabidopsis lyrata subsp. lyrata]10819e-116
XP_002871342 transmembrane CLPTM1 family protein [Arabidopsis lyrata subsp. lyrata]10692e-114
BAA97243 unnamed protein product [Arabidopsis thaliana]10333e-110
NP_680213 transmembrane CLPTM1 family protein [Arabidopsis thaliana]10333e-110

Swiss-Prot top hits (Blast detail)Scoree value
Q54RJ1 CLPTM1-like membrane protein cnrB6432e-066
O96005 Cleft lip and palate transmembrane protein 16308e-065
Q6DEL2 Cleft lip and palate transmembrane protein 1 homolog6291e-064
Q2NL17 Cleft lip and palate transmembrane protein 1 homolog6227e-064
Q8VBZ3 Cleft lip and palate transmembrane protein 1 homolog6173e-063

TrEMBL top hits (Blast detail)Scoree value
Q9FNN8 Cleft lip and palate associated transmembrane protein-like10816e-116
B9DI34 AT5G23575 protein (Fragment)10332e-110
Q56W51 Putative uncharacterized protein At5g2357510332e-110
Q8VZJ5 AT5g08500/MAH20_610332e-110
Q9LT06 Gb|AAC97420.110332e-110

Arabidopsis top hits (Blast detail)Scoree value
AT5G08500.1 transmembrane CLPTM1 family protein10823e-118
AT5G23575.1 transmembrane protein, putative10341e-112

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  25%
 
101  13%
 
63  38%
 
92  25%

Unigene MembersMember information