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Information for unigene UN09024

FASTA Sequence
Unigene ID: UN09024Length: 1143 SSR 
CCATAACAGAACCAACAATAATAGAGTTCATTCAAATTCATGTGTTGCGTAAATTTTGGTTAAAACCCCGAATAAAATCCACAGAG
AGAGAGAGACTAAAGGGTTTATATAACCAAGCCAGCTTCCAATAACAAGTAAACAAAAAAACAAATGCTTCGAGTTTCATCTATCA
ATCCGGAAGACTCAGATGATGATGCAGAGAGAAACTTACACACTCTTCTAATCCTTCTTCTTGATGAAGGCTCCTCTGGGGATTTT
GCTCATCACCTTGCTCAAAACCTTCTCATCGAGCACAGCGTATTGCTTCTTGATCTCCTTCATTGCCTTTTCGCCAAAGGCATCTA
CTTTATCATCATACTTTTCGTAAAGCACGGGAACGGTGAAGAGAAGAACAGTTGCGATATAGATCAAGGTCAAGAAGTTGCATGAG
CTACCAACCTTGGACAAAACCCACAAACCAGCAACAACCATAAGGAACTTCTTGAGATCTCTTCCTAATGCGATGTTCCTAAGAAG
AGTAAAACCACGATTGATTTCAATCCTTAGTCCAGAAGCAAGCTGGAGAACAACTTCCTCGGGGATGTGAACTTCAGGGATATGAG
GAGGTTTCTTGTGAATGAAGGTAGTAGCACTAGACCACAAGAACAACACAGCGAGAGCGAGGATCGAGATGTGGCCGAAGAGAGTG
AGGAGGTTGTACTGAAGCAACTCGAACAAGATCCAGGAGAGAGTTGCAGCACCCAACACTCCTCCTGATACCTTCTTGTTCCTCCA
TAGGAATATGTCGGCAGCTGATTCATTAAAAAAAAAACAACAACATGTAAATAGCAAATCGAATCGTTCTTCTGAATCTACTTCTG
AATCTCAGATCCGATGAGAGAAAGTATATAGAATTAGAGATCCATACGTTTTCCGCCGCCGAAGACCATGTGGACAGGCTTTTCCT
TCCGAAGAGGCGGTAGATCTTCGTCTTGATAGACGACTCTTTCTTCTCGTCATCTGAATCAGAAGAAGAAGAGTCGTCGTGACCGT
GGATCTTCTCGGCGATCTTCTCCATGATCGATTCCTCGTGTTTGTGCTCTTCCGCCATTGTAAGTTAGCTTCAAAACCTCCGCAAA
AACCCTAAAACTTTGTCTCAGTGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887921 reticulon family protein [Arabidopsis lyrata subsp. lyrata]8768e-092
NP_001185307 reticulon-like protein B3 [Arabidopsis thaliana]8623e-090
NP_176592 reticulon-like protein B3 [Arabidopsis thaliana]8571e-089
BAH57206 AT1G64090 [Arabidopsis thaliana]8571e-089
XP_002870630 VIRB2-interacting protein 3 [Arabidopsis lyrata subsp. lyrata]7692e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q9SH59 Reticulon-like protein B38575e-091
Q9FFS0 Reticulon-like protein B47662e-080
Q9SUR3 Reticulon-like protein B16749e-070
Q9SUT9 Reticulon-like protein B26685e-069
O82352 Reticulon-like protein B56084e-062

TrEMBL top hits (Blast detail)Scoree value
C0Z3C7 AT1G64090 protein8579e-090
B2WS91 Reticulon family protein6776e-069
B9RCJ7 Putative uncharacterized protein6732e-068
B7FIA7 Putative uncharacterized protein6704e-068
A9PAK3 Predicted protein6624e-067

Arabidopsis top hits (Blast detail)Scoree value
AT1G64090.1 reticulon family protein (RTNLB3)8584e-092
AT5G41600.1 BTI3 (VIRB2-INTERACTING PROTEIN 3)7671e-081
AT4G23630.1 BTI1 (VIRB2-INTERACTING PROTEIN 1)6748e-071
AT4G11220.1 BTI2 (VIRB2-INTERACTING PROTEIN 2)6684e-070
AT2G46170.1 reticulon family protein (RTNLB5)6084e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
101  25%
 
81  25%

Unigene MembersMember information