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Information for unigene UN09041
| FASTA Sequence |
| Unigene ID: UN09041 | Length: 1290 |
| SNP | GTACTACACTGGTTGCTAACACCTCTAACATGCCAGTGGCTGCTCGTGAAGCCTCAATTTACACAGGAATCACTATCGCTGAATAT
TTCAGAGATATGGGCTACAATGTTAGTATGATGGCAGACTCAACTTCCCGTTGGGCAGAAGCATTGAGAGAAATTTCAGGACGGCT
GGCTGAAATGCCTGCCGACAGTGGATATCCTGCCTATCTAGCAGCACGTTTAGCATCTTTCTATGAACGTGCGGGTAAAGTAAAAT
GTCTCGGTGGACCAGAACGTGATGGAAGTGTCACAATTGTTGGTGCTGTTTCACCTCCTGGTGGAGACTTTTCAGATCCTGTGACT
TCTGCAACCCTTAGTATTGTGCAGGTCTTCTGGGGTTTGGACAAAAAGCTTGCCCAGAGAAAGCATTTTCCTTCTGTTAATTGGCT
GATTTCCTACTCGAAGTATTCGACGGCGTTGGAATCTTTCTATGAGAAATTCGATCCAGATTTCATCAACATCAGGACAAAGGCCA
GAGAGGTGTTGCAGAGGGAGGATGATCTTAATGAAATTGTCCAGCTTGTGGGAAAAGATGCGCTAGCGGAAGGTGACAAAATCACC
TTGGAAACAGCTAAGCTGTTGAGGGAAGACTACCTTGCTCAAAACGCTTTCACACCGTATGACAAGTTCTGCCCTTTTTACAAGTC
TGTGTGGATGATGCGTAACATTATCCATTTCTACAACCTAGCCAACCAGGCGGTTGAAAGAGCAGCTGGAATGGATGGTCAAAAGA
TTACTTACACTCTAATCAAGCATCGCTTGGGAGATCTTTTCTACCGTCTAGTGTCTCAGAAGTTCGAAGATCCAGCAGAAGGTGAG
GCTGCGCTGGTGGCGAAATTCAAGAAACTGTACGAGGATCTCACTGCTGGATTCCGTGCCTTGGAGGATGAAACTCGGTAAGCTGT
CGTCAAGTCTGAAAAAGTGTTCTCTTGTGTGTTTTGAGCCAAAACAACTATCATAGTGGTCGGTATTCTATTTATCTGGTGGTTTG
GTTCGATCGAGCGAGTTTTATCCCTGCGAACGTCGTGAATCTCCCGGCTCTGTGCTGTGTTATATGTTTTGATTCGTTGTTGTTTT
TATTTTGTATGTTTTCGTTTTGATGGTAATAAGCTACAGCCAAAATGAGTCATCTGTTTGATTTGATGTACCTCTCAATTCAATAA
GTTATTATTATTGTCCAAATGTATTGAGAAAAAAACTATTGGTGATACTTTTACTTTCTCATAATATCATTATTTTGTATTTTATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887760 VHA-A [Arabidopsis lyrata subsp. lyrata] | 1587 | 3e-174 |
| NP_178011 V-type proton ATPase catalytic subunit A [Arabidopsis thaliana] | 1578 | 4e-173 |
| Q9SM09 RecName: Full=V-type proton ATPase catalytic subunit A; Short=V-ATPase subunit A; AltName: Full=V-ATPase 69 kDa subunit; AltName: Full=Vacuolar proton pump subunit alpha | 1578 | 4e-173 |
| BAA89598 vacuolar H+-ATPase A subunit [Citrus unshiu] | 1578 | 4e-173 |
| BAD94121 vacuolar-type H+-ATPase subunit A [Arabidopsis thaliana] | 1573 | 1e-172 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23654 V-type proton ATPase catalytic subunit A | 1578 | 2e-174 |
| Q9SM09 V-type proton ATPase catalytic subunit A | 1578 | 2e-174 |
| Q39291 V-type proton ATPase catalytic subunit A | 1545 | 1e-170 |
| P09469 V-type proton ATPase catalytic subunit A | 1541 | 3e-170 |
| P31405 V-type proton ATPase catalytic subunit A | 1540 | 4e-170 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WLF6 AT1G78900 protein | 1578 | 3e-173 |
| Q9MB47 Vacuolar H+-ATPase A subunit (Fragment) | 1578 | 3e-173 |
| Q56X25 Vacuolar-type H+-ATPase subunit A | 1573 | 1e-172 |
| B9DHY6 AT1G78900 protein (Fragment) | 1571 | 2e-172 |
| B9RHV0 ATP synthase alpha subunit vacuolar, putative | 1563 | 1e-171 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G78900.1 VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A); ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism | 1579 | 1e-175 |
| AT1G78900.2 VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A); ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism | 1579 | 1e-175 |
| AT1G76030.1 vacuolar ATP synthase subunit B / V-ATPase B subunit / vacuolar proton pump B subunit / V-ATPase 57 kDa subunit | 194 | 4e-015 |
| AT1G20260.1 hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism | 194 | 4e-015 |
| AT4G38510.1 vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative | 194 | 4e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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