 |
Information for unigene UN09110
| FASTA Sequence |
| Unigene ID: UN09110 | Length: 838 |
| SNP | CGAATAAAACACACACTCTTTCTTATGGAAAATCATGTTATGTGATAATCAAAGGCAAAGGTTACAGATAAAAGTGTTGATGATGA
GATCATAAACAAAGAAAGCAAATGAATAAGACATATTCTTTCTTCGGGAAAAACATATAATGTGATATATGATCAACGGCAAGCGA
GATTTATTAAACAGAGCAGGTTGAAGAAGAAATCATGCACTGGGAGGCTTGTAGAGCTTCTCAACCATCTTCCTATACTCTTCTTG
GTTGCTCCAGAGCTGAGCTGCTTGAGTGTTCAATGGTGAGCTGATGTTCGGTTCTCCCAGAAGGCTCTGAATCGATAGTAGTATTG
TCCTCACATCATATGCAGATGACCATTTATCCTGAAGAATGTCCAAACAGATATTGCCATGGAGATCAACATTGGGGTGGAAGCAA
GTAGTCTGGAACTTGATCTTGGGAGGTTTGAAAGGATAGTCATTGGAGAAAGAGAGGGAGAGTCTGTACTCAGTTCCTTCAAACAC
AGTGTCTTTGCTTCCTGTTATCGTCCCTTTCCAACAGAAGATGTTGTCTTCCTCCGGGAAAGCAGATATTCCCGGGTCACCTCCCA
TCATCAAGCCCATGAGTTCAGATTGCAGCCTTTTGAGAACAGATTGGCTGTCGACAGTCTTACTCGGAGGAGCGGATTGCTTTGAT
CCGTTTGACGCCGGAGGATCTGCGGCAGGAGTATTCCCTTGGTACCCATTAACGGCAGCCATCACAAGGATCGATCGAAAGTAAGA
GAACGAAGAGAAGAGTACAAAGATCGTTCTTCTTTCTTTCAATGAGTAAGTGAGAGAGGAGTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564572 ubiquitin-conjugating enzyme E2 20 [Arabidopsis thaliana] | 896 | 2e-094 |
| AAM67229 E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana] | 890 | 1e-093 |
| XP_002885355 ubiquitin-conjugating enzyme 19 [Arabidopsis lyrata subsp. lyrata] | 868 | 4e-091 |
| NP_566653 ubiquitin-conjugating enzyme E2 19 [Arabidopsis thaliana] | 866 | 7e-091 |
| XP_002513536 ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis] | 814 | 7e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L7T3 Ubiquitin-conjugating enzyme E2 20 | 896 | 1e-095 |
| Q9LJZ5 Ubiquitin-conjugating enzyme E2 19 | 866 | 3e-092 |
| Q54XS6 Probable ubiquitin-conjugating enzyme E2 C | 538 | 3e-054 |
| Q95044 Ubiquitin-conjugating enzyme E2 C | 522 | 2e-052 |
| Q9VTY6 Ubiquitin-conjugating enzyme E2 C | 510 | 6e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RIG7 Ubiquitin carrier protein | 814 | 5e-085 |
| A9PD53 Ubiquitin carrier protein | 807 | 3e-084 |
| A9PAG1 Ubiquitin carrier protein | 795 | 8e-083 |
| C6T5N5 Putative uncharacterized protein | 759 | 1e-078 |
| B7FMR9 Ubiquitin carrier protein | 752 | 8e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G50490.1 UBC20 (ubiquitin-conjugating enzyme 20); ubiquitin-protein ligase | 897 | 7e-097 |
| AT3G20060.1 UBC19 (ubiquitin-conjugating enzyme19); ubiquitin-protein ligase | 867 | 2e-093 |
| AT3G20060.2 UBC19 (ubiquitin-conjugating enzyme19); ubiquitin-protein ligase | 683 | 5e-072 |
| AT2G02760.1 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase | 331 | 3e-031 |
| AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase | 330 | 4e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
