Information for unigene UN09120
| FASTA Sequence |
| Unigene ID: UN09120 | Length: 1041 |
SSR | | GGAGTGAGTGAGGGAGAGAGAGAGATGAACCACATGCACACCACCAAATGTCTGCTTCTTCTTTATTTATTAATTTCCCATTGATT
CGCCTCAGATCTCTCTCCCATCTCCCTCTGTCATCGCTCCGATCCGTTTCTCAGAGAAAGTTACCGACTTTTCGAGCTTTCTCCGG
TACTACCACAATGACAGATGCTGGAATGGATGCTGTTCAGAGACGCCTCATGTTCGAAGACGAATGCATTCTTGTTGACGAAACTG
ATCGTGTTGTTGGGCATGACAGCAAATATAATTGTCATCTGATGGAAAATATTGAAGCTAAGAATCTACTTCACAGGGCCTTTAGT
GTATTTTTATTCAACTCCAACTATGAGTTGCTTCTCCAGCAAAGGTCGAAATCAAAGGTGACCTTCCCTCTAGTGTGGACAAACAC
TTGCTGCAGCCATCCTCTTTACCGTGAATCTGAGCTTATCGAGGAAAATACTCTTGGTGTGAGGAATGCTGCACAGAGAAAGCTTC
TTGACGAGCTCGGTATTGTAGCTGAAGATGTACCAGTCGATGAGTTCACCGCCTTGGGACGTATACTTTACAAGGCTCCTTCTGAT
GGCAAATGGGGAGAGCACGAACTGGACTACTTGCTGTTCATTGTGAGGGATGTTAAGGTCCAACCAAATCCAGATGAAGTGGCGGA
TATCAAGTATGTGAGCAGGGAAGAGCTGAAGGAGCTGGTGAAGAAAGCAGATGCAGGGGAGGAAGGTTTGAAACTATCTCCATGGT
TCAGATTGGTGGTGGATAACTTCTTGATGAAGTGGTGGGATCATGTTGAGAAAGGCACTTTGAGTGAAGCTGTAGACATGAAAACC
ATCCACAAGCTTTGAACTTTTTTTCTCTAAGTTTTTTTTGGATAACCTCTCTGTTTTTGATATTTTTGATGATAATAATTGGGAGA
AGAGATATTCCAAGCAAGTCACGCAATGGAAGTTTCGTTTTTTTTTTTTTGTTATGAATTTTATCTTTCAATAATCGAAGCTCGAC
TTTTACACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_186927 Isopentenyl-diphosphate Delta-isomerase II [Arabidopsis thaliana] | 1258 | 3e-136 |
| AAF29979 isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase [Arabidopsis thaliana] | 1245 | 1e-134 |
| XP_002884339 hypothetical protein ARALYDRAFT_477520 [Arabidopsis lyrata subsp. lyrata] | 1237 | 1e-133 |
| AAF36996 isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase [Brassica oleracea var. botrytis] | 1228 | 1e-132 |
| NP_197148 Isopentenyl-diphosphate Delta-isomerase I [Arabidopsis thaliana] | 1147 | 3e-123 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42553 Isopentenyl-diphosphate Delta-isomerase II | 1258 | 2e-137 |
| Q38929 Isopentenyl-diphosphate Delta-isomerase I | 1126 | 3e-122 |
| Q39471 Isopentenyl-diphosphate Delta-isomerase II | 1088 | 8e-118 |
| O48964 Isopentenyl-diphosphate Delta-isomerase I | 1077 | 1e-116 |
| Q39664 Isopentenyl-diphosphate Delta-isomerase II | 1077 | 1e-116 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M6K3 Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase | 1245 | 8e-135 |
| Q9M592 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase | 1228 | 7e-133 |
| Q9M6K2 Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase (Fragment) | 1129 | 2e-121 |
| Q6EJD1 Isopentenyl pyrophosphate isomerase | 1125 | 6e-121 |
| Q9M6K8 Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase (Fragment) | 1109 | 5e-119 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02780.1 IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2); isopentenyl-diphosphate delta-isomerase | 1259 | 1e-138 |
| AT5G16440.1 IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1); isopentenyl-diphosphate delta-isomerase | 1148 | 8e-126 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
| Software error:
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For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
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