RadishBase

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Information for unigene UN09132

FASTA Sequence

Unigene ID: UN09132	Length: 1043	SSR
GGATTTCGGCGTTGTTTTCTCTCTATAGTAATGTGTAGTATTGATCTATAAATCATTCTCTTTCTCTCTACCCGTTTCACCCCTTA TAGGAAAAAAAAACCAGTGAATCATCATCATCATCTTCTTCTTCCTTCTCCAAAAACAGATTTTCCGACCAAACTTGATCTGTTTT GTCTAAAGCTTAATTAATAATAAATTAATGGCGGAAGAACATCGATGCCAAACACCGGAAGGCCACCGTCTCTGCGTTAACAACTG CGGTTTCCTCGGCAGCTCAGCCACCATGAATCTCTGCTCCAATTGCTACGGCGATCTCTGCCTCAACCAACAGCAAGCCTCCGCCA AACCAACCGTCGAATCCTCTCTCCCCGCCGCATCTCCTCCGTCTTCGTCGTCGGAGATCACCGAATCCTCCTCACCCTCGTCTCCG ACTGCGGAGAAACAAATCAAGCTGATCCCGACGACGGAGCAGAAGCAGGAGCCGCCGCAACGGCCTAACCGGTGCACAGTGTGCAG GAAACGGGTCGGGTTGACCGGATTCATGTGCCGGTGCATGACGACTTTCTGCGGGACCCACAGGTATCCGGAGGTTCACGGGTGCA CGTTCGATTTCAAATCGGCGGGGCGCGAAGAGATCGCAAAGGCTAATCCTTTGGTCATAGCCGCGAAGCTCCAGAAGATATGATCT CAGCCGTTGGTTTTGCGTTGACCTTCCTTCTTCTCTCTCCCGCGTTTACCGAGACAAGGGGTGTATCTCAGCCGTTTGTTATGTCG AAAACATAAACTTTGTTGTTGCGGAAACGTGTTACGTGATTAAAGGTTGAGATGGTTGTTACAATACTCACCTTTCATATTATTTT CCTTTTCTTCCGAAAGAATTTAAGTTTAAAAAAAAAAAATTTGTGTGGCTTCTTGCTTGTGGAAAAAAAAGATTTTCTTTTGGGGG AAAAATATAATAAAGTTGTGTCTCTTGTTTTTTTTTCAATTTTATTTTTGTTTGGGAATGTTTTATATACTGACGACATAAAGACG GTTTGATTGTC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002879601 hypothetical protein ARALYDRAFT_902745 [Arabidopsis lyrata subsp. lyrata]	643	7e-065
NP_565844 zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Arabidopsis thaliana]	637	4e-064
NP_190848 zinc finger A20 and AN1 domain-containing stress-associated protein 6 [Arabidopsis thaliana]	613	2e-061
XP_002876168 hypothetical protein ARALYDRAFT_485652 [Arabidopsis lyrata subsp. lyrata]	613	2e-061
AAK68811 zinc finger-like protein [Arabidopsis thaliana]	597	2e-059

Swiss-Prot top hits (Blast detail)	Score	e value
Q9SJM6 Zinc finger A20 and AN1 domain-containing stress-associated protein 4	637	2e-065
Q94B40 Zinc finger A20 and AN1 domain-containing stress-associated protein 6	613	9e-063
Q9ZNU9 Zinc finger A20 and AN1 domain-containing stress-associated protein 3	415	9e-040
Q7Y1W9 Zinc finger A20 and AN1 domain-containing stress-associated protein 9	390	7e-037
Q6H754 Zinc finger A20 and AN1 domain-containing stress-associated protein 5	364	7e-034

TrEMBL top hits (Blast detail)	Score	e value
B9SRU8 Zinc finger protein, putative	510	1e-049
B3IX31 Transcription factor C2H2	484	1e-046
C6T3R9 Putative uncharacterized protein	451	9e-043
C4NAM1 Stress-associated protein 9 (Fragment)	422	2e-039
C4NAK8 Stress-associated protein 9 (Fragment)	408	9e-038

Arabidopsis top hits (Blast detail)	Score	e value
AT2G36320.1 zinc finger (AN1-like) family protein	638	1e-066
AT3G52800.1 zinc finger (AN1-like) family protein	614	6e-064
AT2G27580.1 zinc finger (AN1-like) family protein	416	6e-041
AT1G12440.1 zinc finger (AN1-like) family protein	362	1e-034
AT1G12440.2 zinc finger (AN1-like) family protein	362	1e-034

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	2			13%


18	4			25%


20	7			44%


19	3			19%

Unigene Members	Member information